Cluster: C36.CMAG_2_CGC2
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 1
- Substrate:
- Genome ID: C36.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C36_contig_3796 | C36_contig_3796_119 | 132886 | 136473 | - | 3.A.1.106.4 |
| TC | C36_contig_3796 | C36_contig_3796_120 | 136674 | 137693 | - | 3.D.4.3.2 |
| TC | C36_contig_3796 | C36_contig_3796_121 | 137684 | 139072 | - | 3.D.4.3.2 |
| TF | C36_contig_3796 | C36_contig_3796_122 | 139158 | 139589 | - | Rrf2 |
| pfam | C36_contig_3796 | C36_contig_3796_123 | 139809 | 140303 | - | MoCF_biosynth |
| CAZyme | C36_contig_3796 | C36_contig_3796_124 | 140312 | 141172 | - | CE4 |
| pfam | C36_contig_3796 | C36_contig_3796_125 | 147780 | 148511 | + | SIMPL |
| pfam | C36_contig_3796 | C36_contig_3796_126 | 148492 | 149238 | - | Ubie_methyltran | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | C36_contig_3796 | C36_contig_3796_127 | 149585 | 150805 | + | 2.A.23.4.1 |
| STP | C36_contig_3796 | C36_contig_3796_128 | 151051 | 152568 | + | Pyr_redox_2 |
| NULL(UNKNOWN) | C36_contig_3796 | C36_contig_3796_129 | 152760 | 153416 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C36_contig_3796 | C36_contig_3796_130 | 153544 | 154665 | - | 2.A.86.1.11 |
| TC | C36_contig_3796 | C36_contig_3796_131 | 154892 | 155929 | - | 1.B.6.1.7 |
| TC | C36_contig_3796 | C36_contig_3796_132 | 156605 | 158014 | - | 2.A.66.1.28 |
| TC | C36_contig_3796 | C36_contig_3796_133 | 158270 | 167056 | - | 1.B.40.2.2 |
| pfam | C36_contig_3796 | C36_contig_3796_134 | 167726 | 168697 | - | CT_A_B |
| pfam | C36_contig_3796 | C36_contig_3796_135 | 168735 | 169478 | - | CT_C_D |
| TC | C36_contig_3796 | C36_contig_3796_136 | 169553 | 170749 | - | 2.A.55.3.2 |
Gene ID: C36_contig_3796_119
Type: TC
Location: 132886 - 136473 (-)
Type: TC
Location: 132886 - 136473 (-)
Gene ID: C36_contig_3796_120
Type: TC
Location: 136674 - 137693 (-)
Type: TC
Location: 136674 - 137693 (-)
Gene ID: C36_contig_3796_121
Type: TC
Location: 137684 - 139072 (-)
Type: TC
Location: 137684 - 139072 (-)
Gene ID: C36_contig_3796_122
Type: TF
Location: 139158 - 139589 (-)
Type: TF
Location: 139158 - 139589 (-)
Gene ID: C36_contig_3796_123
Type: pfam
Location: 139809 - 140303 (-)
Type: pfam
Location: 139809 - 140303 (-)
Gene ID: C36_contig_3796_124
Type: CAZyme
Location: 140312 - 141172 (-)
Type: CAZyme
Location: 140312 - 141172 (-)
Gene ID: C36_contig_3796_125
Type: pfam
Location: 147780 - 148511 (+)
Type: pfam
Location: 147780 - 148511 (+)
Gene ID: C36_contig_3796_126
Type: pfam
Location: 148492 - 149238 (-)
Type: pfam
Location: 148492 - 149238 (-)
Gene ID: C36_contig_3796_127
Type: TC
Location: 149585 - 150805 (+)
Type: TC
Location: 149585 - 150805 (+)
Gene ID: C36_contig_3796_128
Type: STP
Location: 151051 - 152568 (+)
Type: STP
Location: 151051 - 152568 (+)
Gene ID: C36_contig_3796_129
Type:
Location: 152760 - 153416 (-)
Type:
Location: 152760 - 153416 (-)
Gene ID: C36_contig_3796_130
Type: TC
Location: 153544 - 154665 (-)
Type: TC
Location: 153544 - 154665 (-)
Gene ID: C36_contig_3796_131
Type: TC
Location: 154892 - 155929 (-)
Type: TC
Location: 154892 - 155929 (-)
Gene ID: C36_contig_3796_132
Type: TC
Location: 156605 - 158014 (-)
Type: TC
Location: 156605 - 158014 (-)
Gene ID: C36_contig_3796_133
Type: TC
Location: 158270 - 167056 (-)
Type: TC
Location: 158270 - 167056 (-)
Gene ID: C36_contig_3796_134
Type: pfam
Location: 167726 - 168697 (-)
Type: pfam
Location: 167726 - 168697 (-)
Gene ID: C36_contig_3796_135
Type: pfam
Location: 168735 - 169478 (-)
Type: pfam
Location: 168735 - 169478 (-)
Gene ID: C36_contig_3796_136
Type: TC
Location: 169553 - 170749 (-)
Type: TC
Location: 169553 - 170749 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella parvula_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.