Cluster: C19.bin_2_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: C19.bin_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C19_contig_1097 | C19_contig_1097_64 | 60777 | 61703 | + | 3.A.1.1.11 |
| TC | C19_contig_1097 | C19_contig_1097_65 | 61715 | 62572 | + | 3.A.1.1.11 |
| TF | C19_contig_1097 | C19_contig_1097_66 | 62652 | 63467 | - | HTH_AraC | HTH_AraC |
| CAZyme | C19_contig_1097 | C19_contig_1097_67 | 63567 | 65123 | + | GH28 |
| CAZyme | C19_contig_1097 | C19_contig_1097_68 | 65127 | 66272 | + | GH105 |
Gene ID: C19_contig_1097_64
Type: TC
Location: 60777 - 61703 (+)
Type: TC
Location: 60777 - 61703 (+)
Gene ID: C19_contig_1097_65
Type: TC
Location: 61715 - 62572 (+)
Type: TC
Location: 61715 - 62572 (+)
Gene ID: C19_contig_1097_66
Type: TF
Location: 62652 - 63467 (-)
Type: TF
Location: 62652 - 63467 (-)
Gene ID: C19_contig_1097_67
Type: CAZyme
Location: 63567 - 65123 (+)
Type: CAZyme
Location: 63567 - 65123 (+)
Gene ID: C19_contig_1097_68
Type: CAZyme
Location: 65127 - 66272 (+)
Type: CAZyme
Location: 65127 - 66272 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium duncaniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.