Cluster: C19.bin_2_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C19.bin_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C19_contig_698 | C19_contig_698_1224 | 1297810 | 1299285 | - | GH32 |
| STP | C19_contig_698 | C19_contig_698_1225 | 1299312 | 1300970 | - | SBP_bac_1 |
| TC | C19_contig_698 | C19_contig_698_1226 | 1301153 | 1302067 | - | 3.A.1.1.29 |
| TC | C19_contig_698 | C19_contig_698_1227 | 1302083 | 1303030 | - | 3.A.1.1.10 |
Gene ID: C19_contig_698_1224
Type: CAZyme
Location: 1297810 - 1299285 (-)
Type: CAZyme
Location: 1297810 - 1299285 (-)
Gene ID: C19_contig_698_1225
Type: STP
Location: 1299312 - 1300970 (-)
Type: STP
Location: 1299312 - 1300970 (-)
Gene ID: C19_contig_698_1226
Type: TC
Location: 1301153 - 1302067 (-)
Type: TC
Location: 1301153 - 1302067 (-)
Gene ID: C19_contig_698_1227
Type: TC
Location: 1302083 - 1303030 (-)
Type: TC
Location: 1302083 - 1303030 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium duncaniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C19_contig_698_1226 | vegan > omnivore | 1.14723 | 0.00290 |