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Cluster: C19.CMAG_4_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C19_contig_1058 C19_contig_1058_762 804225 804977 - 3.A.1.7.5
TC C19_contig_1058 C19_contig_1058_763 804995 805885 - 3.A.1.7.5
TC C19_contig_1058 C19_contig_1058_764 805878 806747 - 3.A.1.7.5
pfam C19_contig_1058 C19_contig_1058_765 806744 807667 - PBP_like_2 | PBP_like_2
STP C19_contig_1058 C19_contig_1058_766 807881 809260 + PALP
TC C19_contig_1058 C19_contig_1058_767 809438 810724 + 9.B.10.1.1
pfam C19_contig_1058 C19_contig_1058_768 811255 811743 - CarD_TRCF_RID | CarD_C
pfam C19_contig_1058 C19_contig_1058_769 812040 812849 - SseB | SseB_C
CAZyme C19_contig_1058 C19_contig_1058_770 812869 814857 - CBM26 | GH13_28
Gene ID: C19_contig_1058_762
Type: TC
Location: 804225 - 804977 (-)
Gene ID: C19_contig_1058_763
Type: TC
Location: 804995 - 805885 (-)
Gene ID: C19_contig_1058_764
Type: TC
Location: 805878 - 806747 (-)
Gene ID: C19_contig_1058_765
Type: pfam
Location: 806744 - 807667 (-)
Gene ID: C19_contig_1058_766
Type: STP
Location: 807881 - 809260 (+)
Gene ID: C19_contig_1058_767
Type: TC
Location: 809438 - 810724 (+)
Gene ID: C19_contig_1058_768
Type: pfam
Location: 811255 - 811743 (-)
Gene ID: C19_contig_1058_769
Type: pfam
Location: 812040 - 812849 (-)
Gene ID: C19_contig_1058_770
Type: CAZyme
Location: 812869 - 814857 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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