Cluster: C19.CMAG_4_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C19.CMAG_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C19_contig_1058 | C19_contig_1058_2235 | 2381322 | 2382227 | - | GH25 |
| NULL(UNKNOWN) | C19_contig_1058 | C19_contig_1058_2236 | 2382389 | 2382646 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | C19_contig_1058 | C19_contig_1058_2237 | 2382824 | 2383171 | - | Cupin_2 |
| TC | C19_contig_1058 | C19_contig_1058_2238 | 2383389 | 2385125 | + | 3.A.1.135.5 |
| TC | C19_contig_1058 | C19_contig_1058_2239 | 2385122 | 2386855 | + | 3.A.1.135.7 |
Gene ID: C19_contig_1058_2235
Type: CAZyme
Location: 2381322 - 2382227 (-)
Type: CAZyme
Location: 2381322 - 2382227 (-)
Gene ID: C19_contig_1058_2236
Type:
Location: 2382389 - 2382646 (+)
Type:
Location: 2382389 - 2382646 (+)
Gene ID: C19_contig_1058_2237
Type: pfam
Location: 2382824 - 2383171 (-)
Type: pfam
Location: 2382824 - 2383171 (-)
Gene ID: C19_contig_1058_2238
Type: TC
Location: 2383389 - 2385125 (+)
Type: TC
Location: 2383389 - 2385125 (+)
Gene ID: C19_contig_1058_2239
Type: TC
Location: 2385122 - 2386855 (+)
Type: TC
Location: 2385122 - 2386855 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp003438075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.