Cluster: C19.CMAG_4_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: C19.CMAG_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C19_contig_1058 | C19_contig_1058_2081 | 2225371 | 2226885 | + | 3.A.1.1.27 |
| TC | C19_contig_1058 | C19_contig_1058_2082 | 2226882 | 2227736 | + | 3.A.1.1.27 |
| CAZyme | C19_contig_1058 | C19_contig_1058_2083 | 2228406 | 2230079 | + | GH13_36 |
Gene ID: C19_contig_1058_2081
Type: TC
Location: 2225371 - 2226885 (+)
Type: TC
Location: 2225371 - 2226885 (+)
Gene ID: C19_contig_1058_2082
Type: TC
Location: 2226882 - 2227736 (+)
Type: TC
Location: 2226882 - 2227736 (+)
Gene ID: C19_contig_1058_2083
Type: CAZyme
Location: 2228406 - 2230079 (+)
Type: CAZyme
Location: 2228406 - 2230079 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp003438075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.