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Cluster: C19.CMAG_4_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C19_contig_1058 C19_contig_1058_1547 1628800 1631406 - GH13_28
STP C19_contig_1058 C19_contig_1058_1548 1631887 1633077 + Aminotran_1_2
pfam C19_contig_1058 C19_contig_1058_1549 1633074 1633559 + Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_9 | Acetyltransf_10
TC C19_contig_1058 C19_contig_1058_1550 1633881 1634540 + 3.A.1.3.2
TC C19_contig_1058 C19_contig_1058_1551 1634521 1635195 + 3.A.1.3.16
TC C19_contig_1058 C19_contig_1058_1552 1635200 1635949 + 3.A.1.3.15
TC C19_contig_1058 C19_contig_1058_1553 1635980 1636858 + 3.A.1.3.10
Gene ID: C19_contig_1058_1547
Type: CAZyme
Location: 1628800 - 1631406 (-)
Gene ID: C19_contig_1058_1548
Type: STP
Location: 1631887 - 1633077 (+)
Gene ID: C19_contig_1058_1549
Type: pfam
Location: 1633074 - 1633559 (+)
Gene ID: C19_contig_1058_1550
Type: TC
Location: 1633881 - 1634540 (+)
Gene ID: C19_contig_1058_1551
Type: TC
Location: 1634521 - 1635195 (+)
Gene ID: C19_contig_1058_1552
Type: TC
Location: 1635200 - 1635949 (+)
Gene ID: C19_contig_1058_1553
Type: TC
Location: 1635980 - 1636858 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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