Cluster: C19.CMAG_4_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C19.CMAG_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C19_contig_1058 | C19_contig_1058_1462 | 1546135 | 1547217 | + | 2.A.98.1.4 |
| TC | C19_contig_1058 | C19_contig_1058_1463 | 1547306 | 1548946 | - | 4.C.1.1.4 |
| pfam | C19_contig_1058 | C19_contig_1058_1464 | 1549192 | 1550541 | + | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| peptidase | C19_contig_1058 | C19_contig_1058_1465 | 1551423 | 1552835 | - | M18.UPW |
| CAZyme | C19_contig_1058 | C19_contig_1058_1466 | 1552872 | 1553483 | - | GH23 |
Gene ID: C19_contig_1058_1462
Type: TC
Location: 1546135 - 1547217 (+)
Type: TC
Location: 1546135 - 1547217 (+)
Gene ID: C19_contig_1058_1463
Type: TC
Location: 1547306 - 1548946 (-)
Type: TC
Location: 1547306 - 1548946 (-)
Gene ID: C19_contig_1058_1464
Type: pfam
Location: 1549192 - 1550541 (+)
Type: pfam
Location: 1549192 - 1550541 (+)
Gene ID: C19_contig_1058_1465
Type: peptidase
Location: 1551423 - 1552835 (-)
Type: peptidase
Location: 1551423 - 1552835 (-)
Gene ID: C19_contig_1058_1466
Type: CAZyme
Location: 1552872 - 1553483 (-)
Type: CAZyme
Location: 1552872 - 1553483 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp003438075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.