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Cluster: C171.bin_2_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C171_contig_4031 C171_contig_4031_30 33298 34305 + GT2
CAZyme C171_contig_4031 C171_contig_4031_31 34296 35318 + GT2
pfam C171_contig_4031 C171_contig_4031_32 35719 36819 + MeaB
TC C171_contig_4031 C171_contig_4031_33 36859 38148 - 2.A.66.1.36
STP C171_contig_4031 C171_contig_4031_34 38217 39779 - Pyr_redox_2
CAZyme C171_contig_4031 C171_contig_4031_35 39879 40601 + GT2
peptidase C171_contig_4031 C171_contig_4031_36 40598 41941 + M38.UNW
pfam C171_contig_4031 C171_contig_4031_37 41982 43718 + DUF4153
CAZyme C171_contig_4031 C171_contig_4031_38 43724 44956 - GH154
Gene ID: C171_contig_4031_30
Type: CAZyme
Location: 33298 - 34305 (+)
Gene ID: C171_contig_4031_31
Type: CAZyme
Location: 34296 - 35318 (+)
Gene ID: C171_contig_4031_32
Type: pfam
Location: 35719 - 36819 (+)
Gene ID: C171_contig_4031_33
Type: TC
Location: 36859 - 38148 (-)
Gene ID: C171_contig_4031_34
Type: STP
Location: 38217 - 39779 (-)
Gene ID: C171_contig_4031_35
Type: CAZyme
Location: 39879 - 40601 (+)
Gene ID: C171_contig_4031_36
Type: peptidase
Location: 40598 - 41941 (+)
Gene ID: C171_contig_4031_37
Type: pfam
Location: 41982 - 43718 (+)
Gene ID: C171_contig_4031_38
Type: CAZyme
Location: 43724 - 44956 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C171_contig_4031_38 vegetarian > vegan 1.09317 0.01127

🧭 Explore Read Mapping of CGC

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