Cluster: C171.bin_2_CGC40
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C171.bin_2
- CGC Family ID: CGCFAM_02163
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C171_contig_233 | C171_contig_233_313 | 367110 | 367832 | - | 1.B.42.1.2 |
| TC | C171_contig_233 | C171_contig_233_314 | 367945 | 370137 | + | 2.A.16.2.2 |
| NULL(UNKNOWN) | C171_contig_233 | C171_contig_233_315 | 370274 | 371536 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | C171_contig_233 | C171_contig_233_316 | 371556 | 372347 | + | RrnaAD | Methyltransf_11 | Methyltransf_25 |
| CAZyme | C171_contig_233 | C171_contig_233_317 | 372357 | 375242 | + | CBM67 | GH78 |
Gene ID: C171_contig_233_313
Type: TC
Location: 367110 - 367832 (-)
Type: TC
Location: 367110 - 367832 (-)
Gene ID: C171_contig_233_314
Type: TC
Location: 367945 - 370137 (+)
Type: TC
Location: 367945 - 370137 (+)
Gene ID: C171_contig_233_315
Type:
Location: 370274 - 371536 (+)
Type:
Location: 370274 - 371536 (+)
Gene ID: C171_contig_233_316
Type: pfam
Location: 371556 - 372347 (+)
Type: pfam
Location: 371556 - 372347 (+)
Gene ID: C171_contig_233_317
Type: CAZyme
Location: 372357 - 375242 (+)
Type: CAZyme
Location: 372357 - 375242 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.