Cluster: C171.bin_2_CGC4
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: C171.bin_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C171_contig_3358 | C171_contig_3358_227 | 260126 | 262117 | - | GH127 |
| pfam | C171_contig_3358 | C171_contig_3358_228 | 262170 | 263483 | - | OEP | OEP |
| TC | C171_contig_3358 | C171_contig_3358_229 | 263480 | 266509 | - | 2.A.6.2.33 |
| TC | C171_contig_3358 | C171_contig_3358_230 | 266522 | 267592 | - | 2.A.6.2.28 |
| TC | C171_contig_3358 | C171_contig_3358_231 | 267813 | 269093 | + | 1.A.23.4.5 |
| NULL(UNKNOWN) | C171_contig_3358 | C171_contig_3358_232 | 269096 | 269911 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| sulfatase | C171_contig_3358 | C171_contig_3358_233 | 269979 | 270965 | - | S1_17 |
| CAZyme | C171_contig_3358 | C171_contig_3358_234 | 271130 | 272470 | + | GH109 |
| pfam | C171_contig_3358 | C171_contig_3358_235 | 272550 | 273185 | - | NlpE_C |
| peptidase | C171_contig_3358 | C171_contig_3358_236 | 273211 | 275277 | - | M03.UPA |
| TC | C171_contig_3358 | C171_contig_3358_237 | 275358 | 278105 | - | 1.B.42.1.8 |
Gene ID: C171_contig_3358_227
Type: CAZyme
Location: 260126 - 262117 (-)
Type: CAZyme
Location: 260126 - 262117 (-)
Gene ID: C171_contig_3358_228
Type: pfam
Location: 262170 - 263483 (-)
Type: pfam
Location: 262170 - 263483 (-)
Gene ID: C171_contig_3358_229
Type: TC
Location: 263480 - 266509 (-)
Type: TC
Location: 263480 - 266509 (-)
Gene ID: C171_contig_3358_230
Type: TC
Location: 266522 - 267592 (-)
Type: TC
Location: 266522 - 267592 (-)
Gene ID: C171_contig_3358_231
Type: TC
Location: 267813 - 269093 (+)
Type: TC
Location: 267813 - 269093 (+)
Gene ID: C171_contig_3358_232
Type:
Location: 269096 - 269911 (-)
Type:
Location: 269096 - 269911 (-)
Gene ID: C171_contig_3358_233
Type: sulfatase
Location: 269979 - 270965 (-)
Type: sulfatase
Location: 269979 - 270965 (-)
Gene ID: C171_contig_3358_234
Type: CAZyme
Location: 271130 - 272470 (+)
Type: CAZyme
Location: 271130 - 272470 (+)
Gene ID: C171_contig_3358_235
Type: pfam
Location: 272550 - 273185 (-)
Type: pfam
Location: 272550 - 273185 (-)
Gene ID: C171_contig_3358_236
Type: peptidase
Location: 273211 - 275277 (-)
Type: peptidase
Location: 273211 - 275277 (-)
Gene ID: C171_contig_3358_237
Type: TC
Location: 275358 - 278105 (-)
Type: TC
Location: 275358 - 278105 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.