Cluster: C171.bin_2_CGC38
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: C171.bin_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C171_contig_233 | C171_contig_233_129 | 162600 | 164969 | + | CBM67 | GH78 |
| sulfatase | C171_contig_233 | C171_contig_233_130 | 165049 | 165960 | - | S1_19 |
| peptidase | C171_contig_233 | C171_contig_233_131 | 165982 | 166746 | - | M48.UPC |
| TC | C171_contig_233 | C171_contig_233_132 | 167030 | 168976 | + | 1.A.33.1.2 |
| pfam | C171_contig_233 | C171_contig_233_133 | 169571 | 169843 | - | OEP |
| TC | C171_contig_233 | C171_contig_233_134 | 169952 | 170710 | - | 2.A.6.2.23 |
| pfam | C171_contig_233 | C171_contig_233_135 | 171515 | 173149 | - | Cpn60_TCP1 |
| pfam | C171_contig_233 | C171_contig_233_136 | 173191 | 173460 | - | Cpn10 |
| TC | C171_contig_233 | C171_contig_233_137 | 173674 | 175497 | - | 3.A.18.1.1 |
| STP | C171_contig_233 | C171_contig_233_138 | 175779 | 176333 | + | NUDIX |
| NULL(UNKNOWN) | C171_contig_233 | C171_contig_233_139 | 176349 | 176840 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C171_contig_233 | C171_contig_233_140 | 176815 | 177312 | - | GH23 |
| TC | C171_contig_233 | C171_contig_233_141 | 177309 | 177728 | - | 1.E.19.1.15 |
Gene ID: C171_contig_233_129
Type: CAZyme
Location: 162600 - 164969 (+)
Type: CAZyme
Location: 162600 - 164969 (+)
Gene ID: C171_contig_233_130
Type: sulfatase
Location: 165049 - 165960 (-)
Type: sulfatase
Location: 165049 - 165960 (-)
Gene ID: C171_contig_233_131
Type: peptidase
Location: 165982 - 166746 (-)
Type: peptidase
Location: 165982 - 166746 (-)
Gene ID: C171_contig_233_132
Type: TC
Location: 167030 - 168976 (+)
Type: TC
Location: 167030 - 168976 (+)
Gene ID: C171_contig_233_133
Type: pfam
Location: 169571 - 169843 (-)
Type: pfam
Location: 169571 - 169843 (-)
Gene ID: C171_contig_233_134
Type: TC
Location: 169952 - 170710 (-)
Type: TC
Location: 169952 - 170710 (-)
Gene ID: C171_contig_233_135
Type: pfam
Location: 171515 - 173149 (-)
Type: pfam
Location: 171515 - 173149 (-)
Gene ID: C171_contig_233_136
Type: pfam
Location: 173191 - 173460 (-)
Type: pfam
Location: 173191 - 173460 (-)
Gene ID: C171_contig_233_137
Type: TC
Location: 173674 - 175497 (-)
Type: TC
Location: 173674 - 175497 (-)
Gene ID: C171_contig_233_138
Type: STP
Location: 175779 - 176333 (+)
Type: STP
Location: 175779 - 176333 (+)
Gene ID: C171_contig_233_139
Type:
Location: 176349 - 176840 (-)
Type:
Location: 176349 - 176840 (-)
Gene ID: C171_contig_233_140
Type: CAZyme
Location: 176815 - 177312 (-)
Type: CAZyme
Location: 176815 - 177312 (-)
Gene ID: C171_contig_233_141
Type: TC
Location: 177309 - 177728 (-)
Type: TC
Location: 177309 - 177728 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C171_contig_233_139 | vegetarian > vegan | 1.22151 | 0.01127 |