Cluster: C171.bin_2_CGC37
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: C171.bin_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C171_contig_233 | C171_contig_233_117 | 148706 | 149953 | - | 9.B.169.1.1 |
| TC | C171_contig_233 | C171_contig_233_118 | 150222 | 151061 | + | 8.A.5.1.4 |
| NULL(UNKNOWN) | C171_contig_233 | C171_contig_233_119 | 151372 | 151821 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | C171_contig_233 | C171_contig_233_120 | 151812 | 152687 | - | THF_DHG_CYH | THF_DHG_CYH_C |
| TC | C171_contig_233 | C171_contig_233_121 | 152706 | 154034 | - | 3.A.5.1.1 |
| pfam | C171_contig_233 | C171_contig_233_122 | 154246 | 155616 | - | Aldedh |
| pfam | C171_contig_233 | C171_contig_233_123 | 155839 | 156069 | + | DUF2582 |
| TC | C171_contig_233 | C171_contig_233_124 | 156126 | 157322 | - | 2.A.1.46.5 |
| CAZyme | C171_contig_233 | C171_contig_233_125 | 158104 | 159669 | - | GT22 |
Gene ID: C171_contig_233_117
Type: TC
Location: 148706 - 149953 (-)
Type: TC
Location: 148706 - 149953 (-)
Gene ID: C171_contig_233_118
Type: TC
Location: 150222 - 151061 (+)
Type: TC
Location: 150222 - 151061 (+)
Gene ID: C171_contig_233_119
Type:
Location: 151372 - 151821 (+)
Type:
Location: 151372 - 151821 (+)
Gene ID: C171_contig_233_120
Type: pfam
Location: 151812 - 152687 (-)
Type: pfam
Location: 151812 - 152687 (-)
Gene ID: C171_contig_233_121
Type: TC
Location: 152706 - 154034 (-)
Type: TC
Location: 152706 - 154034 (-)
Gene ID: C171_contig_233_122
Type: pfam
Location: 154246 - 155616 (-)
Type: pfam
Location: 154246 - 155616 (-)
Gene ID: C171_contig_233_123
Type: pfam
Location: 155839 - 156069 (+)
Type: pfam
Location: 155839 - 156069 (+)
Gene ID: C171_contig_233_124
Type: TC
Location: 156126 - 157322 (-)
Type: TC
Location: 156126 - 157322 (-)
Gene ID: C171_contig_233_125
Type: CAZyme
Location: 158104 - 159669 (-)
Type: CAZyme
Location: 158104 - 159669 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C171_contig_233_117 | vegetarian > omnivore | 1.49540 | 0.01458 |
| C171_contig_233_117 | vegetarian > vegan | 1.05220 | 0.01127 |
| C171_contig_233_120 | vegetarian > omnivore | 1.06217 | 0.01458 |
| C171_contig_233_120 | vegetarian > vegan | 1.05132 | 0.01127 |
| C171_contig_233_122 | vegetarian > omnivore | 1.07682 | 0.01458 |
| C171_contig_233_122 | vegetarian > vegan | 1.01267 | 0.01074 |