Cluster: C171.bin_2_CGC31
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: C171.bin_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C171_contig_3281 | C171_contig_3281_91 | 112365 | 114359 | - | 2.A.67.4.2 |
| pfam | C171_contig_3281 | C171_contig_3281_92 | 114544 | 116571 | - | Transketolase_N | Transket_pyr | Transketolase_C | Transketolase_C_1 |
| STP | C171_contig_3281 | C171_contig_3281_93 | 116810 | 120358 | - | Fer4 |
| CAZyme | C171_contig_3281 | C171_contig_3281_94 | 120572 | 121252 | + | GT51 |
| NULL(UNKNOWN) | C171_contig_3281 | C171_contig_3281_95 | 121180 | 121800 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C171_contig_3281 | C171_contig_3281_96 | 121918 | 123285 | + | 2.A.66.1.32 |
| pfam | C171_contig_3281 | C171_contig_3281_97 | 123335 | 124087 | + | Fer4_19 | zf-CDGSH | zf-CDGSH |
| CAZyme | C171_contig_3281 | C171_contig_3281_98 | 124266 | 127004 | + | CBM67 | GH78 |
| pfam | C171_contig_3281 | C171_contig_3281_99 | 127152 | 128375 | + | Glyco_hydro_42 |
| NULL(UNKNOWN) | C171_contig_3281 | C171_contig_3281_100 | 128377 | 129585 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C171_contig_3281 | C171_contig_3281_101 | 129693 | 130622 | + | CE1 |
Gene ID: C171_contig_3281_91
Type: TC
Location: 112365 - 114359 (-)
Type: TC
Location: 112365 - 114359 (-)
Gene ID: C171_contig_3281_92
Type: pfam
Location: 114544 - 116571 (-)
Type: pfam
Location: 114544 - 116571 (-)
Gene ID: C171_contig_3281_93
Type: STP
Location: 116810 - 120358 (-)
Type: STP
Location: 116810 - 120358 (-)
Gene ID: C171_contig_3281_94
Type: CAZyme
Location: 120572 - 121252 (+)
Type: CAZyme
Location: 120572 - 121252 (+)
Gene ID: C171_contig_3281_95
Type:
Location: 121180 - 121800 (-)
Type:
Location: 121180 - 121800 (-)
Gene ID: C171_contig_3281_96
Type: TC
Location: 121918 - 123285 (+)
Type: TC
Location: 121918 - 123285 (+)
Gene ID: C171_contig_3281_97
Type: pfam
Location: 123335 - 124087 (+)
Type: pfam
Location: 123335 - 124087 (+)
Gene ID: C171_contig_3281_98
Type: CAZyme
Location: 124266 - 127004 (+)
Type: CAZyme
Location: 124266 - 127004 (+)
Gene ID: C171_contig_3281_99
Type: pfam
Location: 127152 - 128375 (+)
Type: pfam
Location: 127152 - 128375 (+)
Gene ID: C171_contig_3281_100
Type:
Location: 128377 - 129585 (+)
Type:
Location: 128377 - 129585 (+)
Gene ID: C171_contig_3281_101
Type: CAZyme
Location: 129693 - 130622 (+)
Type: CAZyme
Location: 129693 - 130622 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.