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Cluster: C171.bin_2_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C171_contig_2390 C171_contig_2390_448 501573 503843 + 2.A.37.1.5
pfam C171_contig_2390 C171_contig_2390_449 503936 505390 + Mur_ligase | Mur_ligase_C | Mur_ligase_M
TC C171_contig_2390 C171_contig_2390_450 505412 506659 + 9.B.146.1.6
pfam C171_contig_2390 C171_contig_2390_451 506662 508002 + Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N
TC C171_contig_2390 C171_contig_2390_452 508033 509319 + 2.A.103.1.3
CAZyme C171_contig_2390 C171_contig_2390_453 509378 510493 + GT28
Gene ID: C171_contig_2390_448
Type: TC
Location: 501573 - 503843 (+)
Gene ID: C171_contig_2390_449
Type: pfam
Location: 503936 - 505390 (+)
Gene ID: C171_contig_2390_450
Type: TC
Location: 505412 - 506659 (+)
Gene ID: C171_contig_2390_451
Type: pfam
Location: 506662 - 508002 (+)
Gene ID: C171_contig_2390_452
Type: TC
Location: 508033 - 509319 (+)
Gene ID: C171_contig_2390_453
Type: CAZyme
Location: 509378 - 510493 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C171_contig_2390_450 vegetarian > vegan 1.17933 0.00229

🧭 Explore Read Mapping of CGC

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