Cluster: C171.bin_2_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C171.bin_2
- CGC Family ID: CGCFAM_02162
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C171_contig_2390 | C171_contig_2390_335 | 369791 | 372115 | - | GH106 |
| pfam | C171_contig_2390 | C171_contig_2390_336 | 372166 | 372882 | - | PEMT |
| pfam | C171_contig_2390 | C171_contig_2390_337 | 372879 | 373481 | - | PAP2 | PAP2_3 |
| TC | C171_contig_2390 | C171_contig_2390_338 | 373553 | 375052 | - | 2.A.50.2.1 |
Gene ID: C171_contig_2390_335
Type: CAZyme
Location: 369791 - 372115 (-)
Type: CAZyme
Location: 369791 - 372115 (-)
Gene ID: C171_contig_2390_336
Type: pfam
Location: 372166 - 372882 (-)
Type: pfam
Location: 372166 - 372882 (-)
Gene ID: C171_contig_2390_337
Type: pfam
Location: 372879 - 373481 (-)
Type: pfam
Location: 372879 - 373481 (-)
Gene ID: C171_contig_2390_338
Type: TC
Location: 373553 - 375052 (-)
Type: TC
Location: 373553 - 375052 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C171_contig_2390_337 | vegetarian > omnivore | 1.06806 | 0.01458 |