Cluster: C171.bin_2_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C171.bin_2
- CGC Family ID: CGCFAM_07948
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C171_contig_2390 | C171_contig_2390_46 | 43380 | 44378 | + | 1.A.13.4.1 |
| TC | C171_contig_2390 | C171_contig_2390_47 | 44391 | 45410 | + | 1.A.13.4.1 |
| peptidase | C171_contig_2390 | C171_contig_2390_48 | 45693 | 46718 | + | S33.UPW |
| CAZyme | C171_contig_2390 | C171_contig_2390_49 | 46823 | 48748 | + | GH127 |
Gene ID: C171_contig_2390_46
Type: TC
Location: 43380 - 44378 (+)
Type: TC
Location: 43380 - 44378 (+)
Gene ID: C171_contig_2390_47
Type: TC
Location: 44391 - 45410 (+)
Type: TC
Location: 44391 - 45410 (+)
Gene ID: C171_contig_2390_48
Type: peptidase
Location: 45693 - 46718 (+)
Type: peptidase
Location: 45693 - 46718 (+)
Gene ID: C171_contig_2390_49
Type: CAZyme
Location: 46823 - 48748 (+)
Type: CAZyme
Location: 46823 - 48748 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C171_contig_2390_48 | vegetarian > vegan | 1.09143 | 0.00229 |