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Cluster: C171.bin_2_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C171_contig_4031 C171_contig_4031_697 869886 871202 - CE7
TC C171_contig_4031 C171_contig_4031_698 871240 872763 - 2.A.17.1.2
CAZyme C171_contig_4031 C171_contig_4031_699 872910 874952 + GH13_8
pfam C171_contig_4031 C171_contig_4031_700 874966 875289 + MannoseP_isomer | Cupin_2
pfam C171_contig_4031 C171_contig_4031_701 875308 875760 + Acetyltransf_1 | FR47 | Acetyltransf_7 | Acetyltransf_10
CAZyme C171_contig_4031 C171_contig_4031_702 875820 877676 - PL35
NULL(UNKNOWN) C171_contig_4031 C171_contig_4031_703 877695 878126 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C171_contig_4031 C171_contig_4031_704 878276 879505 - GH88
Gene ID: C171_contig_4031_697
Type: CAZyme
Location: 869886 - 871202 (-)
Gene ID: C171_contig_4031_698
Type: TC
Location: 871240 - 872763 (-)
Gene ID: C171_contig_4031_699
Type: CAZyme
Location: 872910 - 874952 (+)
Gene ID: C171_contig_4031_700
Type: pfam
Location: 874966 - 875289 (+)
Gene ID: C171_contig_4031_701
Type: pfam
Location: 875308 - 875760 (+)
Gene ID: C171_contig_4031_702
Type: CAZyme
Location: 875820 - 877676 (-)
Gene ID: C171_contig_4031_703
Type:
Location: 877695 - 878126 (-)
Gene ID: C171_contig_4031_704
Type: CAZyme
Location: 878276 - 879505 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C171_contig_4031_700 vegetarian > vegan 14.52447 0.01127

🧭 Explore Read Mapping of CGC

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