Cluster: C171.bin_2_CGC18
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: C171.bin_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C171_contig_4031 | C171_contig_4031_697 | 869886 | 871202 | - | CE7 |
| TC | C171_contig_4031 | C171_contig_4031_698 | 871240 | 872763 | - | 2.A.17.1.2 |
| CAZyme | C171_contig_4031 | C171_contig_4031_699 | 872910 | 874952 | + | GH13_8 |
| pfam | C171_contig_4031 | C171_contig_4031_700 | 874966 | 875289 | + | MannoseP_isomer | Cupin_2 |
| pfam | C171_contig_4031 | C171_contig_4031_701 | 875308 | 875760 | + | Acetyltransf_1 | FR47 | Acetyltransf_7 | Acetyltransf_10 |
| CAZyme | C171_contig_4031 | C171_contig_4031_702 | 875820 | 877676 | - | PL35 |
| NULL(UNKNOWN) | C171_contig_4031 | C171_contig_4031_703 | 877695 | 878126 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C171_contig_4031 | C171_contig_4031_704 | 878276 | 879505 | - | GH88 |
Gene ID: C171_contig_4031_697
Type: CAZyme
Location: 869886 - 871202 (-)
Type: CAZyme
Location: 869886 - 871202 (-)
Gene ID: C171_contig_4031_698
Type: TC
Location: 871240 - 872763 (-)
Type: TC
Location: 871240 - 872763 (-)
Gene ID: C171_contig_4031_699
Type: CAZyme
Location: 872910 - 874952 (+)
Type: CAZyme
Location: 872910 - 874952 (+)
Gene ID: C171_contig_4031_700
Type: pfam
Location: 874966 - 875289 (+)
Type: pfam
Location: 874966 - 875289 (+)
Gene ID: C171_contig_4031_701
Type: pfam
Location: 875308 - 875760 (+)
Type: pfam
Location: 875308 - 875760 (+)
Gene ID: C171_contig_4031_702
Type: CAZyme
Location: 875820 - 877676 (-)
Type: CAZyme
Location: 875820 - 877676 (-)
Gene ID: C171_contig_4031_703
Type:
Location: 877695 - 878126 (-)
Type:
Location: 877695 - 878126 (-)
Gene ID: C171_contig_4031_704
Type: CAZyme
Location: 878276 - 879505 (-)
Type: CAZyme
Location: 878276 - 879505 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C171_contig_4031_700 | vegetarian > vegan | 14.52447 | 0.01127 |