Cluster: C171.bin_2_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: C171.bin_2
- CGC Family ID: CGCFAM_00061
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C171_contig_4031 | C171_contig_4031_628 | 770390 | 771859 | + | GT2 |
| pfam | C171_contig_4031 | C171_contig_4031_629 | 771884 | 772825 | + | DUF4922 | Ap4A_phos_N |
| pfam | C171_contig_4031 | C171_contig_4031_630 | 772822 | 774123 | + | SpoIID |
| TC | C171_contig_4031 | C171_contig_4031_631 | 774165 | 776039 | + | 2.A.1.25.5 |
| CAZyme | C171_contig_4031 | C171_contig_4031_632 | 776036 | 777271 | + | GH171 |
Gene ID: C171_contig_4031_628
Type: CAZyme
Location: 770390 - 771859 (+)
Type: CAZyme
Location: 770390 - 771859 (+)
Gene ID: C171_contig_4031_629
Type: pfam
Location: 771884 - 772825 (+)
Type: pfam
Location: 771884 - 772825 (+)
Gene ID: C171_contig_4031_630
Type: pfam
Location: 772822 - 774123 (+)
Type: pfam
Location: 772822 - 774123 (+)
Gene ID: C171_contig_4031_631
Type: TC
Location: 774165 - 776039 (+)
Type: TC
Location: 774165 - 776039 (+)
Gene ID: C171_contig_4031_632
Type: CAZyme
Location: 776036 - 777271 (+)
Type: CAZyme
Location: 776036 - 777271 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C171_contig_4031_630 | vegetarian > vegan | 1.08919 | 0.01127 |