Cluster: C171.bin_2_CGC15
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 8
- Substrate:
- Genome ID: C171.bin_2
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C171_contig_4031 | C171_contig_4031_598 | 733910 | 734806 | + | GT2 |
| CAZyme | C171_contig_4031 | C171_contig_4031_599 | 734816 | 736006 | + | GT2 |
| pfam | C171_contig_4031 | C171_contig_4031_600 | 736012 | 736623 | + | Hexapep | Hexapep_2 | Hexapep_2 |
| CAZyme | C171_contig_4031 | C171_contig_4031_601 | 736650 | 737582 | + | GT2 |
| TC | C171_contig_4031 | C171_contig_4031_602 | 737595 | 739043 | + | 2.A.66.2.23 |
| CAZyme | C171_contig_4031 | C171_contig_4031_603 | 739040 | 740170 | + | GT4 |
| CAZyme | C171_contig_4031 | C171_contig_4031_604 | 740171 | 741322 | + | GT4 |
| CAZyme | C171_contig_4031 | C171_contig_4031_605 | 741340 | 742188 | + | GT2 |
| pfam | C171_contig_4031 | C171_contig_4031_606 | 742364 | 743431 | - | Exo_endo_phos |
| pfam | C171_contig_4031 | C171_contig_4031_607 | 743707 | 744882 | + | Acyl_transf_3 |
| CAZyme | C171_contig_4031 | C171_contig_4031_608 | 744896 | 746014 | + | GT4 |
| CAZyme | C171_contig_4031 | C171_contig_4031_609 | 746011 | 747189 | + | GT2 |
Gene ID: C171_contig_4031_598
Type: CAZyme
Location: 733910 - 734806 (+)
Type: CAZyme
Location: 733910 - 734806 (+)
Gene ID: C171_contig_4031_599
Type: CAZyme
Location: 734816 - 736006 (+)
Type: CAZyme
Location: 734816 - 736006 (+)
Gene ID: C171_contig_4031_600
Type: pfam
Location: 736012 - 736623 (+)
Type: pfam
Location: 736012 - 736623 (+)
Gene ID: C171_contig_4031_601
Type: CAZyme
Location: 736650 - 737582 (+)
Type: CAZyme
Location: 736650 - 737582 (+)
Gene ID: C171_contig_4031_602
Type: TC
Location: 737595 - 739043 (+)
Type: TC
Location: 737595 - 739043 (+)
Gene ID: C171_contig_4031_603
Type: CAZyme
Location: 739040 - 740170 (+)
Type: CAZyme
Location: 739040 - 740170 (+)
Gene ID: C171_contig_4031_604
Type: CAZyme
Location: 740171 - 741322 (+)
Type: CAZyme
Location: 740171 - 741322 (+)
Gene ID: C171_contig_4031_605
Type: CAZyme
Location: 741340 - 742188 (+)
Type: CAZyme
Location: 741340 - 742188 (+)
Gene ID: C171_contig_4031_606
Type: pfam
Location: 742364 - 743431 (-)
Type: pfam
Location: 742364 - 743431 (-)
Gene ID: C171_contig_4031_607
Type: pfam
Location: 743707 - 744882 (+)
Type: pfam
Location: 743707 - 744882 (+)
Gene ID: C171_contig_4031_608
Type: CAZyme
Location: 744896 - 746014 (+)
Type: CAZyme
Location: 744896 - 746014 (+)
Gene ID: C171_contig_4031_609
Type: CAZyme
Location: 746011 - 747189 (+)
Type: CAZyme
Location: 746011 - 747189 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C171_contig_4031_599 | vegetarian > vegan | 1.15751 | 0.01127 |