Cluster: C171.bin_2_CGC13
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 5
- Substrate:
- Genome ID: C171.bin_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C171_contig_4031 | C171_contig_4031_530 | 649475 | 650596 | + | GT4 |
| pfam | C171_contig_4031 | C171_contig_4031_531 | 650593 | 651732 | + | Glyco_tran_WbsX |
| CAZyme | C171_contig_4031 | C171_contig_4031_532 | 651908 | 653038 | + | GT4 |
| CAZyme | C171_contig_4031 | C171_contig_4031_533 | 653194 | 655938 | - | CBM67 | GH78 |
| CAZyme | C171_contig_4031 | C171_contig_4031_534 | 655949 | 657082 | - | GH33 |
| TC | C171_contig_4031 | C171_contig_4031_535 | 657211 | 657879 | - | 2.A.115.2.8 |
| NULL(UNKNOWN) | C171_contig_4031 | C171_contig_4031_536 | 658017 | 660734 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C171_contig_4031 | C171_contig_4031_537 | 661104 | 664346 | + | GH106 |
Gene ID: C171_contig_4031_530
Type: CAZyme
Location: 649475 - 650596 (+)
Type: CAZyme
Location: 649475 - 650596 (+)
Gene ID: C171_contig_4031_531
Type: pfam
Location: 650593 - 651732 (+)
Type: pfam
Location: 650593 - 651732 (+)
Gene ID: C171_contig_4031_532
Type: CAZyme
Location: 651908 - 653038 (+)
Type: CAZyme
Location: 651908 - 653038 (+)
Gene ID: C171_contig_4031_533
Type: CAZyme
Location: 653194 - 655938 (-)
Type: CAZyme
Location: 653194 - 655938 (-)
Gene ID: C171_contig_4031_534
Type: CAZyme
Location: 655949 - 657082 (-)
Type: CAZyme
Location: 655949 - 657082 (-)
Gene ID: C171_contig_4031_535
Type: TC
Location: 657211 - 657879 (-)
Type: TC
Location: 657211 - 657879 (-)
Gene ID: C171_contig_4031_536
Type:
Location: 658017 - 660734 (-)
Type:
Location: 658017 - 660734 (-)
Gene ID: C171_contig_4031_537
Type: CAZyme
Location: 661104 - 664346 (+)
Type: CAZyme
Location: 661104 - 664346 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.