Cluster: C171.bin_2_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: C171.bin_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C171_contig_167 | C171_contig_167_1 | 233 | 1402 | + | GH171 |
| CAZyme | C171_contig_167 | C171_contig_167_2 | 1392 | 3881 | + | GH20 |
| peptidase | C171_contig_167 | C171_contig_167_3 | 3897 | 5210 | + | S12.UPW |
| TC | C171_contig_167 | C171_contig_167_4 | 5313 | 7157 | - | 3.A.6.1.1 |
Gene ID: C171_contig_167_1
Type: CAZyme
Location: 233 - 1402 (+)
Type: CAZyme
Location: 233 - 1402 (+)
Gene ID: C171_contig_167_2
Type: CAZyme
Location: 1392 - 3881 (+)
Type: CAZyme
Location: 1392 - 3881 (+)
Gene ID: C171_contig_167_3
Type: peptidase
Location: 3897 - 5210 (+)
Type: peptidase
Location: 3897 - 5210 (+)
Gene ID: C171_contig_167_4
Type: TC
Location: 5313 - 7157 (-)
Type: TC
Location: 5313 - 7157 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.