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Cluster: C151.CMAG_2_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C151_contig_644 C151_contig_644_389 429847 430278 + 1.E.19.1.16
pfam C151_contig_644 C151_contig_644_390 430285 431013 + Amidase_2
STP C151_contig_644 C151_contig_644_391 431577 432191 - TetR_N
TC C151_contig_644 C151_contig_644_392 432522 435212 + 9.B.74.1.3
pfam C151_contig_644 C151_contig_644_393 435820 437409 - Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Amidase_3 | Choline_bind_3 | Choline_bind_3 | Choline_bind_3 | Choline_bind_3 | Choline_bind_3
TC C151_contig_644 C151_contig_644_394 437912 440524 + 3.A.3.2.21
TC C151_contig_644 C151_contig_644_395 440965 442380 + 1.A.26.1.3
NULL(UNKNOWN) C151_contig_644 C151_contig_644_396 442827 445328 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C151_contig_644 C151_contig_644_397 445343 446323 + GT2
TC C151_contig_644 C151_contig_644_398 446394 447389 + 8.A.5.1.6
NULL(UNKNOWN) C151_contig_644 C151_contig_644_399 447541 447678 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) C151_contig_644 C151_contig_644_400 447956 448093 - NULL(UNKNOWN)
[View Structural Homologs]
TC C151_contig_644 C151_contig_644_401 448289 449758 - 2.A.66.1.32
pfam C151_contig_644 C151_contig_644_402 449850 450944 - MMR_HSR1 | FeoB_N | YchF-GTPase_C
pfam C151_contig_644 C151_contig_644_403 451404 453560 + S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5
CAZyme C151_contig_644 C151_contig_644_404 453571 454776 + GH5_4
Gene ID: C151_contig_644_389
Type: TC
Location: 429847 - 430278 (+)
Gene ID: C151_contig_644_390
Type: pfam
Location: 430285 - 431013 (+)
Gene ID: C151_contig_644_391
Type: STP
Location: 431577 - 432191 (-)
Gene ID: C151_contig_644_392
Type: TC
Location: 432522 - 435212 (+)
Gene ID: C151_contig_644_393
Type: pfam
Location: 435820 - 437409 (-)
Gene ID: C151_contig_644_394
Type: TC
Location: 437912 - 440524 (+)
Gene ID: C151_contig_644_395
Type: TC
Location: 440965 - 442380 (+)
Gene ID: C151_contig_644_396
Type:
Location: 442827 - 445328 (+)
Gene ID: C151_contig_644_397
Type: CAZyme
Location: 445343 - 446323 (+)
Gene ID: C151_contig_644_398
Type: TC
Location: 446394 - 447389 (+)
Gene ID: C151_contig_644_399
Type:
Location: 447541 - 447678 (-)
Gene ID: C151_contig_644_400
Type:
Location: 447956 - 448093 (-)
Gene ID: C151_contig_644_401
Type: TC
Location: 448289 - 449758 (-)
Gene ID: C151_contig_644_402
Type: pfam
Location: 449850 - 450944 (-)
Gene ID: C151_contig_644_403
Type: pfam
Location: 451404 - 453560 (+)
Gene ID: C151_contig_644_404
Type: CAZyme
Location: 453571 - 454776 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C151_contig_644_390 vegetarian > omnivore 1.36379 0.00397
C151_contig_644_391 vegan > omnivore 1.82731 0.00168
C151_contig_644_391 vegetarian > omnivore 2.04831 0.00397
C151_contig_644_392 vegan > omnivore 1.50548 0.00168
C151_contig_644_392 vegetarian > omnivore 1.59369 0.00397
C151_contig_644_393 vegetarian > omnivore 1.07968 0.00397
C151_contig_644_397 vegan > omnivore 1.46950 0.00168
C151_contig_644_397 vegetarian > omnivore 1.54069 0.00397
C151_contig_644_399 vegan > omnivore 1.77788 0.00168
C151_contig_644_399 vegetarian > omnivore 2.13574 0.00397
C151_contig_644_400 vegan > omnivore 1.56081 0.00168
C151_contig_644_400 vegetarian > omnivore 1.32671 0.00397
C151_contig_644_404 vegan > omnivore 1.21455 0.00168
C151_contig_644_404 vegetarian > omnivore 1.17061 0.00397

🧭 Explore Read Mapping of CGC

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