Cluster: C151.CMAG_2_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: C151.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C151_contig_644 | C151_contig_644_252 | 278769 | 279452 | + | 1.A.16.5.2 |
| TC | C151_contig_644 | C151_contig_644_253 | 279708 | 280934 | - | 2.A.49.9.3 |
| peptidase | C151_contig_644 | C151_contig_644_254 | 281114 | 281845 | + | M95.UPW |
| CAZyme | C151_contig_644 | C151_contig_644_255 | 282105 | 285584 | + | CBM79 | GH9 |
| CAZyme | C151_contig_644 | C151_contig_644_256 | 285966 | 289130 | + | CBM4 | GH9 |
Gene ID: C151_contig_644_252
Type: TC
Location: 278769 - 279452 (+)
Type: TC
Location: 278769 - 279452 (+)
Gene ID: C151_contig_644_253
Type: TC
Location: 279708 - 280934 (-)
Type: TC
Location: 279708 - 280934 (-)
Gene ID: C151_contig_644_254
Type: peptidase
Location: 281114 - 281845 (+)
Type: peptidase
Location: 281114 - 281845 (+)
Gene ID: C151_contig_644_255
Type: CAZyme
Location: 282105 - 285584 (+)
Type: CAZyme
Location: 282105 - 285584 (+)
Gene ID: C151_contig_644_256
Type: CAZyme
Location: 285966 - 289130 (+)
Type: CAZyme
Location: 285966 - 289130 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000980705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C151_contig_644_252 | vegan > omnivore | 1.10655 | 0.00168 |
| C151_contig_644_252 | vegetarian > omnivore | 1.47053 | 0.00397 |
| C151_contig_644_253 | vegan > omnivore | 1.41083 | 0.00168 |
| C151_contig_644_253 | vegetarian > omnivore | 1.54214 | 0.00397 |
| C151_contig_644_255 | vegan > omnivore | 1.50068 | 0.00168 |
| C151_contig_644_255 | vegetarian > omnivore | 1.33994 | 0.00397 |
| C151_contig_644_256 | vegan > omnivore | 1.56527 | 0.00168 |
| C151_contig_644_256 | vegetarian > omnivore | 1.22648 | 0.00397 |