Cluster: C151.CMAG_2_CGC34
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: C151.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C151_contig_644 | C151_contig_644_2333 | 2549963 | 2551276 | + | 2.A.25.1.9 |
| pfam | C151_contig_644 | C151_contig_644_2334 | 2551415 | 2552716 | - | Enolase_C | Enolase_N |
| CAZyme | C151_contig_644 | C151_contig_644_2335 | 2552954 | 2555350 | - | GH94 |
| pfam | C151_contig_644 | C151_contig_644_2336 | 2555571 | 2556245 | - | TrmO_N | TrmO_C |
| pfam | C151_contig_644 | C151_contig_644_2337 | 2556265 | 2556933 | - | ABC2_membrane_5 |
| TC | C151_contig_644 | C151_contig_644_2338 | 2556930 | 2557793 | - | 3.A.1.149.1 |
Gene ID: C151_contig_644_2333
Type: TC
Location: 2549963 - 2551276 (+)
Type: TC
Location: 2549963 - 2551276 (+)
Gene ID: C151_contig_644_2334
Type: pfam
Location: 2551415 - 2552716 (-)
Type: pfam
Location: 2551415 - 2552716 (-)
Gene ID: C151_contig_644_2335
Type: CAZyme
Location: 2552954 - 2555350 (-)
Type: CAZyme
Location: 2552954 - 2555350 (-)
Gene ID: C151_contig_644_2336
Type: pfam
Location: 2555571 - 2556245 (-)
Type: pfam
Location: 2555571 - 2556245 (-)
Gene ID: C151_contig_644_2337
Type: pfam
Location: 2556265 - 2556933 (-)
Type: pfam
Location: 2556265 - 2556933 (-)
Gene ID: C151_contig_644_2338
Type: TC
Location: 2556930 - 2557793 (-)
Type: TC
Location: 2556930 - 2557793 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000980705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C151_contig_644_2333 | vegan > omnivore | 1.08446 | 0.00168 |
| C151_contig_644_2333 | vegetarian > omnivore | 1.33948 | 0.00397 |
| C151_contig_644_2337 | vegan > omnivore | 2.33089 | 0.00168 |
| C151_contig_644_2337 | vegetarian > omnivore | 2.09891 | 0.00397 |
| C151_contig_644_2338 | vegan > omnivore | 1.66472 | 0.00168 |
| C151_contig_644_2338 | vegetarian > omnivore | 1.55344 | 0.00397 |