Cluster: C151.CMAG_2_CGC33
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: C151.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C151_contig_644 | C151_contig_644_2291 | 2489139 | 2491049 | - | 3.A.1.135.5 |
| TC | C151_contig_644 | C151_contig_644_2292 | 2491046 | 2492779 | - | 3.A.1.135.5 |
| TF | C151_contig_644 | C151_contig_644_2293 | 2492776 | 2493246 | - | MarR |
| NULL(UNKNOWN) | C151_contig_644 | C151_contig_644_2294 | 2493467 | 2494060 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C151_contig_644 | C151_contig_644_2295 | 2494148 | 2495134 | - | GT4 |
| STP | C151_contig_644 | C151_contig_644_2296 | 2495149 | 2496591 | - | ACT |
| pfam | C151_contig_644 | C151_contig_644_2297 | 2496974 | 2497423 | + | PQ-loop |
| CAZyme | C151_contig_644 | C151_contig_644_2298 | 2497728 | 2501123 | + | CBM13 | CBM13 | PL11 |
| peptidase | C151_contig_644 | C151_contig_644_2299 | 2501282 | 2503117 | + | C44.UPW |
| TC | C151_contig_644 | C151_contig_644_2300 | 2503196 | 2505049 | - | 3.A.16.1.2 |
Gene ID: C151_contig_644_2291
Type: TC
Location: 2489139 - 2491049 (-)
Type: TC
Location: 2489139 - 2491049 (-)
Gene ID: C151_contig_644_2292
Type: TC
Location: 2491046 - 2492779 (-)
Type: TC
Location: 2491046 - 2492779 (-)
Gene ID: C151_contig_644_2293
Type: TF
Location: 2492776 - 2493246 (-)
Type: TF
Location: 2492776 - 2493246 (-)
Gene ID: C151_contig_644_2294
Type:
Location: 2493467 - 2494060 (+)
Type:
Location: 2493467 - 2494060 (+)
Gene ID: C151_contig_644_2295
Type: CAZyme
Location: 2494148 - 2495134 (-)
Type: CAZyme
Location: 2494148 - 2495134 (-)
Gene ID: C151_contig_644_2296
Type: STP
Location: 2495149 - 2496591 (-)
Type: STP
Location: 2495149 - 2496591 (-)
Gene ID: C151_contig_644_2297
Type: pfam
Location: 2496974 - 2497423 (+)
Type: pfam
Location: 2496974 - 2497423 (+)
Gene ID: C151_contig_644_2298
Type: CAZyme
Location: 2497728 - 2501123 (+)
Type: CAZyme
Location: 2497728 - 2501123 (+)
Gene ID: C151_contig_644_2299
Type: peptidase
Location: 2501282 - 2503117 (+)
Type: peptidase
Location: 2501282 - 2503117 (+)
Gene ID: C151_contig_644_2300
Type: TC
Location: 2503196 - 2505049 (-)
Type: TC
Location: 2503196 - 2505049 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000980705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C151_contig_644_2293 | vegan > omnivore | 1.50628 | 0.00168 |
| C151_contig_644_2293 | vegetarian > omnivore | 1.13555 | 0.00397 |
| C151_contig_644_2297 | vegan > omnivore | 1.76829 | 0.00168 |
| C151_contig_644_2297 | vegetarian > omnivore | 2.04970 | 0.00397 |