Cluster: C151.CMAG_2_CGC30
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: C151.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C151_contig_644 | C151_contig_644_2153 | 2331758 | 2332645 | - | 3.A.1.1.45 |
| TC | C151_contig_644 | C151_contig_644_2154 | 2332645 | 2333688 | - | 3.A.1.1.34 |
| NULL(UNKNOWN) | C151_contig_644 | C151_contig_644_2155 | 2333812 | 2335299 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C151_contig_644 | C151_contig_644_2156 | 2335635 | 2336426 | - | 3.A.11.2.2 |
| pfam | C151_contig_644 | C151_contig_644_2157 | 2336709 | 2337887 | - | malic | malic | Malic_M |
| pfam | C151_contig_644 | C151_contig_644_2158 | 2338080 | 2339030 | - | Ldh_1_N | Ldh_1_C |
| CAZyme | C151_contig_644 | C151_contig_644_2159 | 2339586 | 2341760 | + | CBM3 | GH9 |
| TC | C151_contig_644 | C151_contig_644_2160 | 2341835 | 2343160 | + | 2.A.37.2.2 |
Gene ID: C151_contig_644_2153
Type: TC
Location: 2331758 - 2332645 (-)
Type: TC
Location: 2331758 - 2332645 (-)
Gene ID: C151_contig_644_2154
Type: TC
Location: 2332645 - 2333688 (-)
Type: TC
Location: 2332645 - 2333688 (-)
Gene ID: C151_contig_644_2155
Type:
Location: 2333812 - 2335299 (-)
Type:
Location: 2333812 - 2335299 (-)
Gene ID: C151_contig_644_2156
Type: TC
Location: 2335635 - 2336426 (-)
Type: TC
Location: 2335635 - 2336426 (-)
Gene ID: C151_contig_644_2157
Type: pfam
Location: 2336709 - 2337887 (-)
Type: pfam
Location: 2336709 - 2337887 (-)
Gene ID: C151_contig_644_2158
Type: pfam
Location: 2338080 - 2339030 (-)
Type: pfam
Location: 2338080 - 2339030 (-)
Gene ID: C151_contig_644_2159
Type: CAZyme
Location: 2339586 - 2341760 (+)
Type: CAZyme
Location: 2339586 - 2341760 (+)
Gene ID: C151_contig_644_2160
Type: TC
Location: 2341835 - 2343160 (+)
Type: TC
Location: 2341835 - 2343160 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000980705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C151_contig_644_2153 | vegan > omnivore | 1.34783 | 0.00168 |
| C151_contig_644_2153 | vegetarian > omnivore | 1.61623 | 0.00397 |
| C151_contig_644_2154 | vegan > omnivore | 1.30571 | 0.00168 |
| C151_contig_644_2154 | vegetarian > omnivore | 1.43392 | 0.00397 |
| C151_contig_644_2155 | vegan > omnivore | 2.19286 | 0.00168 |
| C151_contig_644_2155 | vegetarian > omnivore | 2.07924 | 0.00397 |
| C151_contig_644_2158 | vegan > omnivore | 1.31656 | 0.00168 |
| C151_contig_644_2159 | vegan > omnivore | 1.29871 | 0.00168 |
| C151_contig_644_2159 | vegetarian > omnivore | 1.22878 | 0.00397 |