Cluster: C151.CMAG_2_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: C151.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C151_contig_644 | C151_contig_644_1892 | 2019514 | 2021787 | - | GH9 |
| pfam | C151_contig_644 | C151_contig_644_1893 | 2022044 | 2022301 | - | DUF2325 |
| TC | C151_contig_644 | C151_contig_644_1894 | 2022765 | 2024354 | + | 2.A.21.2.2 |
Gene ID: C151_contig_644_1892
Type: CAZyme
Location: 2019514 - 2021787 (-)
Type: CAZyme
Location: 2019514 - 2021787 (-)
Gene ID: C151_contig_644_1893
Type: pfam
Location: 2022044 - 2022301 (-)
Type: pfam
Location: 2022044 - 2022301 (-)
Gene ID: C151_contig_644_1894
Type: TC
Location: 2022765 - 2024354 (+)
Type: TC
Location: 2022765 - 2024354 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000980705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C151_contig_644_1892 | vegan > omnivore | 2.10172 | 0.00168 |
| C151_contig_644_1892 | vegetarian > omnivore | 1.93770 | 0.00397 |
| C151_contig_644_1893 | vegan > omnivore | 1.91422 | 0.00168 |
| C151_contig_644_1893 | vegetarian > omnivore | 1.69455 | 0.00397 |
| C151_contig_644_1894 | vegan > omnivore | 1.67817 | 0.00168 |
| C151_contig_644_1894 | vegetarian > omnivore | 1.62617 | 0.00397 |