Cluster: C137.bin_11_CGC42
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: C137.bin_11
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_826 | 931522 | 932223 | - | 3.A.1.122.14 |
| NULL(UNKNOWN) | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_827 | 932422 | 933447 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_828 | 933480 | 934778 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_829 | 934804 | 936048 | - | GT4 |
| pfam | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_830 | 936033 | 937184 | - | Glycos_transf_1 | Glyco_trans_1_4 |
| CAZyme | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_831 | 937203 | 938330 | - | GT4 |
| pfam | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_832 | 938327 | 939178 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 |
| TC | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_833 | 939175 | 939807 | - | 9.B.18.1.3 |
| pfam | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_834 | 939827 | 941356 | - | HMGL-like | LeuA_dimer | HCS_D2 |
| TC | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_835 | 941369 | 941722 | - | 3.A.11.1.4 |
Gene ID: C137_contig_729_corr_4_s1_np12_826
Type: TC
Location: 931522 - 932223 (-)
Type: TC
Location: 931522 - 932223 (-)
Gene ID: C137_contig_729_corr_4_s1_np12_827
Type:
Location: 932422 - 933447 (-)
Type:
Location: 932422 - 933447 (-)
Gene ID: C137_contig_729_corr_4_s1_np12_828
Type:
Location: 933480 - 934778 (-)
Type:
Location: 933480 - 934778 (-)
Gene ID: C137_contig_729_corr_4_s1_np12_829
Type: CAZyme
Location: 934804 - 936048 (-)
Type: CAZyme
Location: 934804 - 936048 (-)
Gene ID: C137_contig_729_corr_4_s1_np12_830
Type: pfam
Location: 936033 - 937184 (-)
Type: pfam
Location: 936033 - 937184 (-)
Gene ID: C137_contig_729_corr_4_s1_np12_831
Type: CAZyme
Location: 937203 - 938330 (-)
Type: CAZyme
Location: 937203 - 938330 (-)
Gene ID: C137_contig_729_corr_4_s1_np12_832
Type: pfam
Location: 938327 - 939178 (-)
Type: pfam
Location: 938327 - 939178 (-)
Gene ID: C137_contig_729_corr_4_s1_np12_833
Type: TC
Location: 939175 - 939807 (-)
Type: TC
Location: 939175 - 939807 (-)
Gene ID: C137_contig_729_corr_4_s1_np12_834
Type: pfam
Location: 939827 - 941356 (-)
Type: pfam
Location: 939827 - 941356 (-)
Gene ID: C137_contig_729_corr_4_s1_np12_835
Type: TC
Location: 941369 - 941722 (-)
Type: TC
Location: 941369 - 941722 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.