Cluster: C137.bin_11_CGC32
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: C137.bin_11
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_84 | 98250 | 99125 | + | 3.A.1.1.28 |
| TC | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_85 | 99122 | 99949 | + | 3.A.1.1.7 |
| TF | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_86 | 99976 | 101511 | + | HTH_AraC | HTH_AraC |
| TC | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_87 | 101508 | 103202 | + | 8.A.59.2.1 |
| CAZyme | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_88 | 103199 | 105103 | + | GH127 |
| CAZyme | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_89 | 105110 | 106039 | + | GH43_26 |
| NULL(UNKNOWN) | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_90 | 106712 | 106969 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_91 | 107027 | 108322 | + | SBP_bac_5 |
| TC | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_92 | 108512 | 108784 | + | 3.A.1.5.19 |
Gene ID: C137_contig_729_corr_4_s1_np12_84
Type: TC
Location: 98250 - 99125 (+)
Type: TC
Location: 98250 - 99125 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_85
Type: TC
Location: 99122 - 99949 (+)
Type: TC
Location: 99122 - 99949 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_86
Type: TF
Location: 99976 - 101511 (+)
Type: TF
Location: 99976 - 101511 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_87
Type: TC
Location: 101508 - 103202 (+)
Type: TC
Location: 101508 - 103202 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_88
Type: CAZyme
Location: 103199 - 105103 (+)
Type: CAZyme
Location: 103199 - 105103 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_89
Type: CAZyme
Location: 105110 - 106039 (+)
Type: CAZyme
Location: 105110 - 106039 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_90
Type:
Location: 106712 - 106969 (+)
Type:
Location: 106712 - 106969 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_91
Type: STP
Location: 107027 - 108322 (+)
Type: STP
Location: 107027 - 108322 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_92
Type: TC
Location: 108512 - 108784 (+)
Type: TC
Location: 108512 - 108784 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C137_contig_729_corr_4_s1_np12_92 | vegetarian > vegan | 1.46471 | 0.00701 |