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Cluster: C137.bin_11_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C137_contig_729_corr_4_s0_np12 C137_contig_729_corr_4_s0_np12_465 495761 497446 + GH146
TF C137_contig_729_corr_4_s0_np12 C137_contig_729_corr_4_s0_np12_466 497500 498378 - HTH_AraC | HTH_AraC
CAZyme C137_contig_729_corr_4_s0_np12 C137_contig_729_corr_4_s0_np12_467 498567 499895 + GH4
STP C137_contig_729_corr_4_s0_np12 C137_contig_729_corr_4_s0_np12_468 500293 501555 + SBP_bac_1
TC C137_contig_729_corr_4_s0_np12 C137_contig_729_corr_4_s0_np12_469 501662 502531 + 3.A.1.1.11
TC C137_contig_729_corr_4_s0_np12 C137_contig_729_corr_4_s0_np12_470 502531 503370 + 3.A.1.1.48
CAZyme C137_contig_729_corr_4_s0_np12 C137_contig_729_corr_4_s0_np12_471 503474 505801 + GH2
Gene ID: C137_contig_729_corr_4_s0_np12_465
Type: CAZyme
Location: 495761 - 497446 (+)
Gene ID: C137_contig_729_corr_4_s0_np12_466
Type: TF
Location: 497500 - 498378 (-)
Gene ID: C137_contig_729_corr_4_s0_np12_467
Type: CAZyme
Location: 498567 - 499895 (+)
Gene ID: C137_contig_729_corr_4_s0_np12_468
Type: STP
Location: 500293 - 501555 (+)
Gene ID: C137_contig_729_corr_4_s0_np12_469
Type: TC
Location: 501662 - 502531 (+)
Gene ID: C137_contig_729_corr_4_s0_np12_470
Type: TC
Location: 502531 - 503370 (+)
Gene ID: C137_contig_729_corr_4_s0_np12_471
Type: CAZyme
Location: 503474 - 505801 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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