Cluster: C134.bin_6_CGC65
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 5
- Substrate:
- Genome ID: C134.bin_6
- CGC Family ID: CGCFAM_00608
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C134_contig_431 | C134_contig_431_3362 | 4091748 | 4095287 | + | 1.B.14.6.1 |
| TC | C134_contig_431 | C134_contig_431_3363 | 4095306 | 4097183 | + | 8.A.46.1.3 |
| CAZyme | C134_contig_431 | C134_contig_431_3364 | 4097276 | 4098784 | + | PL10_2 |
| NULL(UNKNOWN) | C134_contig_431 | C134_contig_431_3365 | 4098793 | 4101033 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | C134_contig_431 | C134_contig_431_3366 | 4101089 | 4103206 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C134_contig_431 | C134_contig_431_3367 | 4103480 | 4105831 | + | GH115 |
| CAZyme | C134_contig_431 | C134_contig_431_3368 | 4105895 | 4107283 | + | GH28 |
| CAZyme | C134_contig_431 | C134_contig_431_3369 | 4107280 | 4109187 | + | PL11_1 |
| CAZyme | C134_contig_431 | C134_contig_431_3370 | 4109200 | 4110615 | + | GH105 |
Gene ID: C134_contig_431_3362
Type: TC
Location: 4091748 - 4095287 (+)
Type: TC
Location: 4091748 - 4095287 (+)
Gene ID: C134_contig_431_3363
Type: TC
Location: 4095306 - 4097183 (+)
Type: TC
Location: 4095306 - 4097183 (+)
Gene ID: C134_contig_431_3364
Type: CAZyme
Location: 4097276 - 4098784 (+)
Type: CAZyme
Location: 4097276 - 4098784 (+)
Gene ID: C134_contig_431_3365
Type:
Location: 4098793 - 4101033 (+)
Type:
Location: 4098793 - 4101033 (+)
Gene ID: C134_contig_431_3366
Type:
Location: 4101089 - 4103206 (+)
Type:
Location: 4101089 - 4103206 (+)
Gene ID: C134_contig_431_3367
Type: CAZyme
Location: 4103480 - 4105831 (+)
Type: CAZyme
Location: 4103480 - 4105831 (+)
Gene ID: C134_contig_431_3368
Type: CAZyme
Location: 4105895 - 4107283 (+)
Type: CAZyme
Location: 4105895 - 4107283 (+)
Gene ID: C134_contig_431_3369
Type: CAZyme
Location: 4107280 - 4109187 (+)
Type: CAZyme
Location: 4107280 - 4109187 (+)
Gene ID: C134_contig_431_3370
Type: CAZyme
Location: 4109200 - 4110615 (+)
Type: CAZyme
Location: 4109200 - 4110615 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola vulgatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.