Cluster: C134.bin_6_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: C134.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C134_contig_431 | C134_contig_431_181 | 207510 | 208682 | + | GT4 |
| CAZyme | C134_contig_431 | C134_contig_431_182 | 208714 | 209427 | + | GT26 |
| NULL(UNKNOWN) | C134_contig_431 | C134_contig_431_183 | 209331 | 209561 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | C134_contig_431 | C134_contig_431_184 | 209568 | 210422 | + | YjbH |
| TC | C134_contig_431 | C134_contig_431_185 | 210529 | 211689 | - | 9.B.97.1.2 |
| peptidase | C134_contig_431 | C134_contig_431_186 | 211870 | 213975 | - | M03.UPA |
| pfam | C134_contig_431 | C134_contig_431_187 | 214297 | 216606 | + | FtsX | FtsX | MacB_PCD |
| TC | C134_contig_431 | C134_contig_431_188 | 216641 | 217315 | + | 3.A.1.122.2 |
Gene ID: C134_contig_431_181
Type: CAZyme
Location: 207510 - 208682 (+)
Type: CAZyme
Location: 207510 - 208682 (+)
Gene ID: C134_contig_431_182
Type: CAZyme
Location: 208714 - 209427 (+)
Type: CAZyme
Location: 208714 - 209427 (+)
Gene ID: C134_contig_431_183
Type:
Location: 209331 - 209561 (-)
Type:
Location: 209331 - 209561 (-)
Gene ID: C134_contig_431_184
Type: pfam
Location: 209568 - 210422 (+)
Type: pfam
Location: 209568 - 210422 (+)
Gene ID: C134_contig_431_185
Type: TC
Location: 210529 - 211689 (-)
Type: TC
Location: 210529 - 211689 (-)
Gene ID: C134_contig_431_186
Type: peptidase
Location: 211870 - 213975 (-)
Type: peptidase
Location: 211870 - 213975 (-)
Gene ID: C134_contig_431_187
Type: pfam
Location: 214297 - 216606 (+)
Type: pfam
Location: 214297 - 216606 (+)
Gene ID: C134_contig_431_188
Type: TC
Location: 216641 - 217315 (+)
Type: TC
Location: 216641 - 217315 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola vulgatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.