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Cluster: C134.bin_6_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C134_contig_431 C134_contig_431_85 90641 92395 + 3.A.2.3.3
TC C134_contig_431 C134_contig_431_86 92431 93753 + 3.A.2.3.3
pfam C134_contig_431 C134_contig_431_87 93768 94373 + ATP-synt_D
TC C134_contig_431 C134_contig_431_88 94370 96175 + 3.A.2.2.2
TC C134_contig_431 C134_contig_431_89 96389 96853 + 3.A.2.2.2
CAZyme C134_contig_431 C134_contig_431_90 97108 98778 + GT3
CAZyme C134_contig_431 C134_contig_431_91 98807 101371 + GT35
pfam C134_contig_431 C134_contig_431_92 101611 103368 - DDE_Tnp_1 | DUF772 | DDE_Tnp_1_6
pfam C134_contig_431 C134_contig_431_93 103414 104532 - Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 | DUF4369
TC C134_contig_431 C134_contig_431_94 105034 106422 + 3.A.1.11.8
TC C134_contig_431 C134_contig_431_95 106435 107232 + 3.A.1.11.8
TC C134_contig_431 C134_contig_431_96 107226 108017 + 3.A.1.11.8
Gene ID: C134_contig_431_85
Type: TC
Location: 90641 - 92395 (+)
Gene ID: C134_contig_431_86
Type: TC
Location: 92431 - 93753 (+)
Gene ID: C134_contig_431_87
Type: pfam
Location: 93768 - 94373 (+)
Gene ID: C134_contig_431_88
Type: TC
Location: 94370 - 96175 (+)
Gene ID: C134_contig_431_89
Type: TC
Location: 96389 - 96853 (+)
Gene ID: C134_contig_431_90
Type: CAZyme
Location: 97108 - 98778 (+)
Gene ID: C134_contig_431_91
Type: CAZyme
Location: 98807 - 101371 (+)
Gene ID: C134_contig_431_92
Type: pfam
Location: 101611 - 103368 (-)
Gene ID: C134_contig_431_93
Type: pfam
Location: 103414 - 104532 (-)
Gene ID: C134_contig_431_94
Type: TC
Location: 105034 - 106422 (+)
Gene ID: C134_contig_431_95
Type: TC
Location: 106435 - 107232 (+)
Gene ID: C134_contig_431_96
Type: TC
Location: 107226 - 108017 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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