Cluster: C130.bin_6_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C130.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C130_contig_81 | C130_contig_81_992 | 1085266 | 1087212 | + | GH2 |
| pfam | C130_contig_81 | C130_contig_81_993 | 1087196 | 1088161 | + | Bgal_small_N |
| TF | C130_contig_81 | C130_contig_81_994 | 1088151 | 1088699 | - | PadR |
| TC | C130_contig_81 | C130_contig_81_995 | 1088883 | 1090217 | + | 2.A.115.2.14 |
| TC | C130_contig_81 | C130_contig_81_996 | 1090301 | 1091053 | + | 2.A.102.3.1 |
Gene ID: C130_contig_81_992
Type: CAZyme
Location: 1085266 - 1087212 (+)
Type: CAZyme
Location: 1085266 - 1087212 (+)
Gene ID: C130_contig_81_993
Type: pfam
Location: 1087196 - 1088161 (+)
Type: pfam
Location: 1087196 - 1088161 (+)
Gene ID: C130_contig_81_994
Type: TF
Location: 1088151 - 1088699 (-)
Type: TF
Location: 1088151 - 1088699 (-)
Gene ID: C130_contig_81_995
Type: TC
Location: 1088883 - 1090217 (+)
Type: TC
Location: 1088883 - 1090217 (+)
Gene ID: C130_contig_81_996
Type: TC
Location: 1090301 - 1091053 (+)
Type: TC
Location: 1090301 - 1091053 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_A
Species
Dorea_A longicatena
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C130_contig_81_992 | vegetarian > vegan | 1.64919 | 0.01057 |
| C130_contig_81_993 | vegetarian > vegan | 1.03941 | 0.02369 |