Cluster: C130.CMAG_5_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: C130.CMAG_5
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C130_contig_589 | C130_contig_589_1980 | 2341621 | 2344629 | + | GH2 |
| NULL(UNKNOWN) | C130_contig_589 | C130_contig_589_1981 | 2344633 | 2345088 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C130_contig_589 | C130_contig_589_1982 | 2345242 | 2346705 | + | 2.A.3.7.4 |
| STP | C130_contig_589 | C130_contig_589_1983 | 2347127 | 2347375 | + | PTS-HPr |
| STP | C130_contig_589 | C130_contig_589_1984 | 2347565 | 2347807 | + | FeoA |
| TC | C130_contig_589 | C130_contig_589_1985 | 2347848 | 2348069 | + | 9.A.8.1.6 |
| TC | C130_contig_589 | C130_contig_589_1986 | 2348193 | 2350520 | + | 9.A.8.1.6 |
Gene ID: C130_contig_589_1980
Type: CAZyme
Location: 2341621 - 2344629 (+)
Type: CAZyme
Location: 2341621 - 2344629 (+)
Gene ID: C130_contig_589_1981
Type:
Location: 2344633 - 2345088 (+)
Type:
Location: 2344633 - 2345088 (+)
Gene ID: C130_contig_589_1982
Type: TC
Location: 2345242 - 2346705 (+)
Type: TC
Location: 2345242 - 2346705 (+)
Gene ID: C130_contig_589_1983
Type: STP
Location: 2347127 - 2347375 (+)
Type: STP
Location: 2347127 - 2347375 (+)
Gene ID: C130_contig_589_1984
Type: STP
Location: 2347565 - 2347807 (+)
Type: STP
Location: 2347565 - 2347807 (+)
Gene ID: C130_contig_589_1985
Type: TC
Location: 2347848 - 2348069 (+)
Type: TC
Location: 2347848 - 2348069 (+)
Gene ID: C130_contig_589_1986
Type: TC
Location: 2348193 - 2350520 (+)
Type: TC
Location: 2348193 - 2350520 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp003469205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.