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Cluster: C130.CMAG_5_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C130_contig_589 C130_contig_589_1337 1541586 1542755 - CE9
STP C130_contig_589 C130_contig_589_1338 1542876 1544042 - SIS | SIS
TF C130_contig_589 C130_contig_589_1339 1544157 1544888 - GntR
TC C130_contig_589 C130_contig_589_1340 1545074 1546156 - 4.A.6.1.4
TC C130_contig_589 C130_contig_589_1341 1546146 1546946 - 4.A.6.1.4
TC C130_contig_589 C130_contig_589_1342 1547037 1547519 - 4.A.6.1.4
pfam C130_contig_589 C130_contig_589_1343 1547556 1547837 - YajC
TC C130_contig_589 C130_contig_589_1344 1547837 1548280 - 4.A.6.1.16
Gene ID: C130_contig_589_1337
Type: CAZyme
Location: 1541586 - 1542755 (-)
Gene ID: C130_contig_589_1338
Type: STP
Location: 1542876 - 1544042 (-)
Gene ID: C130_contig_589_1339
Type: TF
Location: 1544157 - 1544888 (-)
Gene ID: C130_contig_589_1340
Type: TC
Location: 1545074 - 1546156 (-)
Gene ID: C130_contig_589_1341
Type: TC
Location: 1546146 - 1546946 (-)
Gene ID: C130_contig_589_1342
Type: TC
Location: 1547037 - 1547519 (-)
Gene ID: C130_contig_589_1343
Type: pfam
Location: 1547556 - 1547837 (-)
Gene ID: C130_contig_589_1344
Type: TC
Location: 1547837 - 1548280 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C130_contig_589_1343 vegan > omnivore 1.00681 0.00701

🧭 Explore Read Mapping of CGC

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