Cluster: C129.CMAG_1_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C129.CMAG_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C129_contig_2368 | C129_contig_2368_1381 | 1495745 | 1496797 | - | GT28 |
| TC | C129_contig_2368 | C129_contig_2368_1382 | 1496806 | 1497990 | - | 2.A.103.1.1 |
| pfam | C129_contig_2368 | C129_contig_2368_1383 | 1498006 | 1499319 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | C129_contig_2368 | C129_contig_2368_1384 | 1499382 | 1500464 | - | 9.B.146.1.6 |
Gene ID: C129_contig_2368_1381
Type: CAZyme
Location: 1495745 - 1496797 (-)
Type: CAZyme
Location: 1495745 - 1496797 (-)
Gene ID: C129_contig_2368_1382
Type: TC
Location: 1496806 - 1497990 (-)
Type: TC
Location: 1496806 - 1497990 (-)
Gene ID: C129_contig_2368_1383
Type: pfam
Location: 1498006 - 1499319 (-)
Type: pfam
Location: 1498006 - 1499319 (-)
Gene ID: C129_contig_2368_1384
Type: TC
Location: 1499382 - 1500464 (-)
Type: TC
Location: 1499382 - 1500464 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_L
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.