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Cluster: C129.CMAG_1_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C129_contig_2368 C129_contig_2368_1315 1425140 1427044 + 2.A.37.1.2
pfam C129_contig_2368 C129_contig_2368_1316 1427081 1429216 - UPF0020 | THUMP | Cons_hypoth95 | Methyltrans_SAM | RlmL_1st
TC C129_contig_2368 C129_contig_2368_1317 1429509 1430501 - 3.A.1.15.5
TC C129_contig_2368 C129_contig_2368_1318 1430633 1431394 - 3.A.16.1.3
CAZyme C129_contig_2368 C129_contig_2368_1319 1431394 1432521 - GH102
Gene ID: C129_contig_2368_1315
Type: TC
Location: 1425140 - 1427044 (+)
Gene ID: C129_contig_2368_1316
Type: pfam
Location: 1427081 - 1429216 (-)
Gene ID: C129_contig_2368_1317
Type: TC
Location: 1429509 - 1430501 (-)
Gene ID: C129_contig_2368_1318
Type: TC
Location: 1430633 - 1431394 (-)
Gene ID: C129_contig_2368_1319
Type: CAZyme
Location: 1431394 - 1432521 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C129_contig_2368_1315 vegetarian > omnivore 1.05862 0.01522
C129_contig_2368_1316 vegan > omnivore 1.44209 0.00918
C129_contig_2368_1316 vegetarian > omnivore 1.32424 0.01522
C129_contig_2368_1317 vegan > omnivore 1.21286 0.00918
C129_contig_2368_1318 vegan > omnivore 1.48005 0.00918
C129_contig_2368_1318 vegetarian > omnivore 1.55960 0.01522
C129_contig_2368_1319 vegetarian > omnivore 1.07082 0.01522

🧭 Explore Read Mapping of CGC

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