dbCAN Logo

Cluster: C129.CMAG_1_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C129_contig_2368 C129_contig_2368_655 674374 675417 + GH3
pfam C129_contig_2368 C129_contig_2368_656 675414 676586 + MTS | tRNA_U5-meth_tr | Methyltransf_31
TC C129_contig_2368 C129_contig_2368_657 676620 677453 - 3.A.1.15.4
TC C129_contig_2368 C129_contig_2368_658 677446 678297 - 3.A.1.15.4
TC C129_contig_2368 C129_contig_2368_659 678301 679197 - 3.A.1.15.4
TC C129_contig_2368 C129_contig_2368_660 679197 680078 - 3.A.1.15.4
Gene ID: C129_contig_2368_655
Type: CAZyme
Location: 674374 - 675417 (+)
Gene ID: C129_contig_2368_656
Type: pfam
Location: 675414 - 676586 (+)
Gene ID: C129_contig_2368_657
Type: TC
Location: 676620 - 677453 (-)
Gene ID: C129_contig_2368_658
Type: TC
Location: 677446 - 678297 (-)
Gene ID: C129_contig_2368_659
Type: TC
Location: 678301 - 679197 (-)
Gene ID: C129_contig_2368_660
Type: TC
Location: 679197 - 680078 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C129_contig_2368_656 vegetarian > omnivore 1.19213 0.01522
C129_contig_2368_656 vegan > omnivore 1.41513 0.00918
C129_contig_2368_657 vegan > omnivore 2.32982 0.00918
C129_contig_2368_657 vegetarian > omnivore 1.37465 0.01522
C129_contig_2368_658 vegetarian > omnivore 1.34280 0.01522
C129_contig_2368_658 vegan > omnivore 2.40791 0.00918

🧭 Explore Read Mapping of CGC

← Back to Cluster List