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Cluster: C129.CMAG_1_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C129_contig_2368 C129_contig_2368_66 70466 71851 - 2.A.47.5.2
TC C129_contig_2368 C129_contig_2368_67 72007 73233 - 2.A.1.12.1
TF C129_contig_2368 C129_contig_2368_68 73407 74117 + GntR
pfam C129_contig_2368 C129_contig_2368_69 74107 75180 + GFO_IDH_MocA | GFO_IDH_MocA_C | NAD_binding_3 | F420_oxidored | GFO_IDH_MocA_C3
CAZyme C129_contig_2368 C129_contig_2368_70 75191 76297 + GH177
pfam C129_contig_2368 C129_contig_2368_71 76375 77007 - PNPOx_N | PNP_phzG_C | Pyridox_oxase_2
TC C129_contig_2368 C129_contig_2368_72 77074 78720 - 3.A.1.5.27
TC C129_contig_2368 C129_contig_2368_73 78889 80298 - 2.A.1.3.51
Gene ID: C129_contig_2368_66
Type: TC
Location: 70466 - 71851 (-)
Gene ID: C129_contig_2368_67
Type: TC
Location: 72007 - 73233 (-)
Gene ID: C129_contig_2368_68
Type: TF
Location: 73407 - 74117 (+)
Gene ID: C129_contig_2368_69
Type: pfam
Location: 74107 - 75180 (+)
Gene ID: C129_contig_2368_70
Type: CAZyme
Location: 75191 - 76297 (+)
Gene ID: C129_contig_2368_71
Type: pfam
Location: 76375 - 77007 (-)
Gene ID: C129_contig_2368_72
Type: TC
Location: 77074 - 78720 (-)
Gene ID: C129_contig_2368_73
Type: TC
Location: 78889 - 80298 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C129_contig_2368_71 vegetarian > omnivore 1.15308 0.01522
C129_contig_2368_72 vegan > omnivore 1.18118 0.00918

🧭 Explore Read Mapping of CGC

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