Cluster: BrooksB_2017_SRR5405894_bin.8_CGC71
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_02381
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_73 | 75202 | 76050 | + | GT2 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_74 | 76031 | 78127 | + | DUF7654 | DUF7657 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_75 | 78148 | 79404 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_76 | 79545 | 80357 | + | 3.A.1.104.1 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_77 | 80373 | 81578 | + | 3.A.1.103.6 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_78 | 81581 | 84742 | + | GT2 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_79 | 84747 | 86894 | + | GT2 | GT2 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_6759 | BrooksB_2017_SRR5405894_bin.8_k119_6759_80 | 86988 | 88007 | + | 9.B.97.1.9 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_73
Type: CAZyme
Location: 75202 - 76050 (+)
Type: CAZyme
Location: 75202 - 76050 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_74
Type: pfam
Location: 76031 - 78127 (+)
Type: pfam
Location: 76031 - 78127 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_75
Type:
Location: 78148 - 79404 (+)
Type:
Location: 78148 - 79404 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_76
Type: TC
Location: 79545 - 80357 (+)
Type: TC
Location: 79545 - 80357 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_77
Type: TC
Location: 80373 - 81578 (+)
Type: TC
Location: 80373 - 81578 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_78
Type: CAZyme
Location: 81581 - 84742 (+)
Type: CAZyme
Location: 81581 - 84742 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_79
Type: CAZyme
Location: 84747 - 86894 (+)
Type: CAZyme
Location: 84747 - 86894 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_6759_80
Type: TC
Location: 86988 - 88007 (+)
Type: TC
Location: 86988 - 88007 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.