PROTEIN: BrooksB_2017_SRR5405894_bin.8_k119_6759_75
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Protein File & Metadata
Source:
BrooksB_2017_SRR5405894_bin.8_k119_6759_75.pdb
Genome ID:
Protein ID:
BrooksB_2017_SRR5405894_bin.8_k119_6759_75
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Protein Sequence
MERMKKSTAE TLNLASAAIL IGMTLLCFFL WTKGIGTQGM FNIYANMNRY MPIGATIVLV 60 LNCYKLKWND LIWIGVAILS ILFYHQFDEL RQAGFLQDIT IALIIFVVLD FKLVEFTKSL 120 RLVFAVLIFV VLLITAFRIF TEIPTPPAGI SIWDKSNKLQ EIWINTNTIG SSVMCSSFLV 180 VTLLQSLEWT WANIAKYPIY LIALACTWVV QSQAAFIAVV FFVFFDLWPS FLKTTVKWGY 240 GLGYSIFLIG IFPLTLFLAN SSNIDLFTGR EDIWKHFYDT LFEVKQQFWV GMPPFTFKRG 300 AQILGNHNSY NATLGQFGLV GLVLMSLFIL YNVWLIIIKD TQATQLSFVI AFFAILLQST 360 MEDTLMAPYW IPITFCLLGL AWQKNQVTAV PLDYSVNVFD PTEEEEPETR LTRRSRRG 418
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A5P3FVF2-F1-model_v4 | 2 | 391 | 2 | 390 | 0.884 |
0.9641 |
| AF-Q9HUG6-F1-model_v4 | 2 | 387 | 5 | 390 | 0.6491 |
0.7076 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A2S058-F1-model_v4 | GH39 | 5 | 384 | 1 | 396 | 0.673 |
0.7615 |
| B7AUF6 | GT4 | 5 | 403 | 12 | 402 | 0.5265 |
0.743 |
| AF-H8L3P3-F1-model_v4 | GT2 | 10 | 408 | 13 | 603 | 0.5227 |
0.7044 |
| AF-A0A7Z3BHU7-F1-model_v4 | GH39 | 8 | 387 | 15 | 417 | 0.5136 |
0.7594 |
| AF-A0A6G6J4Y8-F1-model_v4 | GH39 | 10 | 386 | 17 | 416 | 0.512 |
0.7635 |
| AF-D5MJ04-F1-model_v4 | GT9 | 2 | 410 | 15 | 579 | 0.5103 |
0.6806 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 10 | 407 | 19 | 479 | 0.5056 |
0.6842 |
Structural Homologs -
CAZyme-ID50
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4UM04-F1-model_v4 | 11 | 391 | 1 | 407 | 0.6642 |
0.7379 |
| AF-Q9HUG6-F1-model_v4 | 2 | 387 | 5 | 390 | 0.6491 |
0.7076 |
| AF-Q02729-F1-model_v4 | 7 | 407 | 4 | 423 | 0.6458 |
0.7088 |