Cluster: BrooksB_2017_SRR5405742_bin.5_CGC16
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: BrooksB_2017_SRR5405742_bin.5
- CGC Family ID: CGCFAM_00036
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405742_bin.5_k141_3139 | BrooksB_2017_SRR5405742_bin.5_k141_3139_293 | 293759 | 295174 | - | 9.B.18.1.2 |
| CAZyme | BrooksB_2017_SRR5405742_bin.5_k141_3139 | BrooksB_2017_SRR5405742_bin.5_k141_3139_294 | 295184 | 295954 | - | GT111 |
| CAZyme | BrooksB_2017_SRR5405742_bin.5_k141_3139 | BrooksB_2017_SRR5405742_bin.5_k141_3139_295 | 295956 | 296885 | - | GT2 |
| pfam | BrooksB_2017_SRR5405742_bin.5_k141_3139 | BrooksB_2017_SRR5405742_bin.5_k141_3139_296 | 296960 | 298108 | - | Amino_oxidase | GLF | NAD_binding_8 |
| CAZyme | BrooksB_2017_SRR5405742_bin.5_k141_3139 | BrooksB_2017_SRR5405742_bin.5_k141_3139_297 | 298122 | 299876 | - | GT2 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405742_bin.5_k141_3139 | BrooksB_2017_SRR5405742_bin.5_k141_3139_298 | 299879 | 301813 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405742_bin.5_k141_3139 | BrooksB_2017_SRR5405742_bin.5_k141_3139_299 | 301821 | 302591 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BrooksB_2017_SRR5405742_bin.5_k141_3139 | BrooksB_2017_SRR5405742_bin.5_k141_3139_300 | 302697 | 303428 | - | 3.A.1.103.1 |
| TC | BrooksB_2017_SRR5405742_bin.5_k141_3139 | BrooksB_2017_SRR5405742_bin.5_k141_3139_301 | 303428 | 304219 | - | 3.A.1.103.4 |
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_3139_293
Type: TC
Location: 293759 - 295174 (-)
Type: TC
Location: 293759 - 295174 (-)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_3139_294
Type: CAZyme
Location: 295184 - 295954 (-)
Type: CAZyme
Location: 295184 - 295954 (-)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_3139_295
Type: CAZyme
Location: 295956 - 296885 (-)
Type: CAZyme
Location: 295956 - 296885 (-)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_3139_296
Type: pfam
Location: 296960 - 298108 (-)
Type: pfam
Location: 296960 - 298108 (-)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_3139_297
Type: CAZyme
Location: 298122 - 299876 (-)
Type: CAZyme
Location: 298122 - 299876 (-)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_3139_298
Type:
Location: 299879 - 301813 (-)
Type:
Location: 299879 - 301813 (-)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_3139_299
Type:
Location: 301821 - 302591 (-)
Type:
Location: 301821 - 302591 (-)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_3139_300
Type: TC
Location: 302697 - 303428 (-)
Type: TC
Location: 302697 - 303428 (-)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_3139_301
Type: TC
Location: 303428 - 304219 (-)
Type: TC
Location: 303428 - 304219 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_AC
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.