PROTEIN: BrooksB_2017_SRR5405742_bin.5_k141_3139_298
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Protein File & Metadata
Source:
BrooksB_2017_SRR5405742_bin.5_k141_3139_298.pdb
Genome ID:
Protein ID:
BrooksB_2017_SRR5405742_bin.5_k141_3139_298
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Protein Sequence
MKNYDVISFD IFDTLLSRRL AKPQDVFSLM ESFLSTQKKW VNWPDLVDNF TVLRVKAEET 60 ARYNKVIRFG GEPEILIHDV YAELRNMLHF SENEEDELID IELMIEKLVL FKTKRADLIF 120 KEAIASGAKI IIISDMYWPS NILKEMLLNC GYSISDDIAV FSSGEEGVSK HTGELYKLVR 180 DKLKIPNNKS WLHFGDNQHS DINKAKENNI NTSLADWSCN DYSNIDHWLT KDVVGVSICK 240 FLELPQAKDF YNSDSPLESI GFKYFGPLLL GYISWFVKLA KDKSIEKLIF LARDAHLIQK 300 LYKKYFQNSY PFKQEYMYVS RATAYKIGIT DWPMHRIWSF FGGKNKKSIA KILSLFNLKE 360 ESYLSELKEV GFPSSSYIPN DDEFQKIHWL INKLYEKILK SSSTYRNEYI DYFSSMISDS 420 DKIAFIDVGW AGNIQTVLAR ALSSEWVNKE ICGFYLSTFD NALLNKSEFN NMMGWLVNDG 480 KPENAMQTLL SGGVELLELA MADNTGSTKG YMKDSSGCIV PIREDVTDAE RAYLSSAIQI 540 QDGITQFFEY ISPLIKSLPV SCFNSIFLAD NFMRLILAPS KVEIETLADI THSEAAGDND 600 GRLSLAKKLK LKDRLFKTNT YYDELNKSYW KQSFLIRNRR AFWK 644
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 15 | 644 | 1 | 629 | 0.9491 |
0.9675 |
| AF-Q0P8I2-F1-model_v4 | 1 | 644 | 363 | 905 | 0.5003 |
0.7163 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UKD35065.1 | GT111 | 1 | 643 | 279 | 891 | 0.6546 |
0.8191 |
| WAJ24550.1 | GT2 | 1 | 644 | 336 | 971 | 0.6538 |
0.8161 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 1 | 643 | 389 | 1052 | 0.6523 |
0.8195 |
| A0A0U3BMS4 | GT111 | 1 | 627 | 309 | 868 | 0.65 |
0.8949 |
| AF-A0A0U3BMS4-F1-model_v4 | GT111 | 1 | 627 | 309 | 868 | 0.65 |
0.8949 |
| A0A1I7GMF6 | GT2 | 1 | 643 | 405 | 1070 | 0.6452 |
0.8147 |
| A0A975E9I4 | GT2 | 1 | 635 | 427 | 1004 | 0.6422 |
0.8703 |
| AF-W0DNV7-F1-model_v4 | GT2 | 1 | 642 | 407 | 1072 | 0.6384 |
0.8094 |
| AF-A0A078BDS9-F1-model_v4 | GT2 | 1 | 639 | 438 | 1015 | 0.638 |
0.8681 |
| AF-A0A1D7XMN6-F1-model_v4 | GT2 | 1 | 637 | 336 | 962 | 0.6373 |
0.809 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UKD35065.1 | GT111 | 1 | 643 | 279 | 891 | 0.6546 |
0.8191 |
| WAJ24550.1 | GT2 | 1 | 644 | 336 | 971 | 0.6538 |
0.8161 |
| A0A2I6S8V6 | GT2 | 1 | 643 | 389 | 1052 | 0.6523 |
0.8195 |
| A0A0U3BMS4 | GT111 | 1 | 627 | 309 | 868 | 0.65 |
0.8949 |
| A0A1I7GMF6 | GT2 | 1 | 643 | 405 | 1070 | 0.6452 |
0.8147 |
| A0A975E9I4 | GT2 | 1 | 635 | 427 | 1004 | 0.6422 |
0.8703 |
| A0A078BDS9 | GT2 | 1 | 639 | 438 | 1015 | 0.638 |
0.8681 |
| U5MZQ8 | GT2 | 1 | 639 | 336 | 967 | 0.6338 |
0.7995 |
| A0A974WXG9 | GT4 | 1 | 644 | 430 | 1066 | 0.6291 |
0.8058 |
| WII09730.1 | GT111 | 1 | 635 | 395 | 943 | 0.6134 |
0.8499 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8a0m-assembly1.cif.gz_B | 2 | 644 | 241 | 878 | 0.5976 |
0.7301 |
| 8a0m-assembly2.cif.gz_D | 2 | 644 | 270 | 889 | 0.5806 |
0.7299 |
| 8a0m-assembly2.cif.gz_C | 2 | 644 | 375 | 1028 | 0.5776 |
0.7366 |
| 8a0c-assembly1.cif.gz_A | 2 | 644 | 379 | 1030 | 0.577 |
0.7368 |
| 8a0m-assembly1.cif.gz_A | 2 | 644 | 374 | 1027 | 0.5768 |
0.7355 |
| 8a0c-assembly1.cif.gz_B | 3 | 644 | 380 | 1028 | 0.5731 |
0.7322 |
| 7shg-assembly1.cif.gz_A | 6 | 629 | 8 | 590 | 0.521 |
0.5698 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.