Cluster: BackhedF_2015_ERR525690_bin.1_CGC21
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_00462
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_781 | BackhedF_2015_ERR525690_bin.1_k119_781_104 | 135150 | 137306 | - | GH112 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_781 | BackhedF_2015_ERR525690_bin.1_k119_781_105 | 137303 | 139174 | - | CE12 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_781 | BackhedF_2015_ERR525690_bin.1_k119_781_106 | 139143 | 140192 | - | GH105 |
| NULL(UNKNOWN) | BackhedF_2015_ERR525690_bin.1_k119_781 | BackhedF_2015_ERR525690_bin.1_k119_781_107 | 140259 | 141989 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BackhedF_2015_ERR525690_bin.1_k119_781 | BackhedF_2015_ERR525690_bin.1_k119_781_108 | 142053 | 142970 | - | 3.A.1.1.10 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_781 | BackhedF_2015_ERR525690_bin.1_k119_781_109 | 142984 | 143946 | - | 3.A.1.1.10 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_781 | BackhedF_2015_ERR525690_bin.1_k119_781_110 | 144275 | 145201 | + | HTH_AraC | HTH_AraC |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_781 | BackhedF_2015_ERR525690_bin.1_k119_781_111 | 145349 | 151075 | - | CE12 | PL11_1 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_781_104
Type: CAZyme
Location: 135150 - 137306 (-)
Type: CAZyme
Location: 135150 - 137306 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_781_105
Type: CAZyme
Location: 137303 - 139174 (-)
Type: CAZyme
Location: 137303 - 139174 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_781_106
Type: CAZyme
Location: 139143 - 140192 (-)
Type: CAZyme
Location: 139143 - 140192 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_781_107
Type:
Location: 140259 - 141989 (-)
Type:
Location: 140259 - 141989 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_781_108
Type: TC
Location: 142053 - 142970 (-)
Type: TC
Location: 142053 - 142970 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_781_109
Type: TC
Location: 142984 - 143946 (-)
Type: TC
Location: 142984 - 143946 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_781_110
Type: TF
Location: 144275 - 145201 (+)
Type: TF
Location: 144275 - 145201 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_781_111
Type: CAZyme
Location: 145349 - 151075 (-)
Type: CAZyme
Location: 145349 - 151075 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.