PROTEIN: BackhedF_2015_ERR525690_bin.1_k119_781_107
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Protein File & Metadata
Source:
BackhedF_2015_ERR525690_bin.1_k119_781_107.pdb
Genome ID:
Protein ID:
BackhedF_2015_ERR525690_bin.1_k119_781_107
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Protein Sequence
MKRKLQKAAA LTLAGTMILG AVTGCGGDKT ATTEAKKDQK TEAGSKEADT NKDTANGSDN 60 GTGKGSENGS ESGSEAAKGD YTDYSKGFSE KITIKIPVYD RGFEGWDPTN NYYTKWIQSE 120 FGDKYNVEVQ YVAIGRTTEV TDYMQMIAAG SAPDIIFHYD MPQAVSYYNE GAMQPLDLQE 180 IAYYAPAYSE KLGDTIRDYG EMNGENIFFF ADRDAIYYNW VTLIRQDWLD QVKMEMPTNR 240 EELEAVAQAW KDAGLGTLGE RLVNKSFTYD YAFRGQEVDQ TELALYSDLN VPALTWKPTE 300 NYLRTLNKEY NEGLIDAEFY LKKEEPDVVG DFVSGKTGTY GFYMTNTTDV INSLTTNDPN 360 AKVAVLDPSA FAPKDSKPYY YEYPSYGMVM GMNAKTTDEQ RAAIWMFLDW MIQDDNLFYL 420 QNGVEGQNYT LDEDGIAMPA ADFNGESKLS NNNNKDYWCL VAEVASYGDE QKNLKANRKT 480 LAPAGYEDLI SQSYDYTKKI ESYGLINTIF TKPVESSSEY ASDLSALWQE VYVDMVTSAP 540 EEFDEKYKAA CEEYLDAGYQ EILDEKQALL DEGAYK 576
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DNU8-F1-model_v4 | 87 | 566 | 36 | 440 | 0.6242 |
0.7769 |
| AF-Q8DRJ6-F1-model_v4 | 88 | 576 | 59 | 513 | 0.5964 |
0.719 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 80 | 575 | 37 | 506 | 0.7143 |
0.8291 |
| AF-A0A1Q2TKJ3-F1-model_v4 | GH49 | 3 | 566 | 200 | 797 | 0.4843 |
0.5807 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 80 | 575 | 37 | 506 | 0.7143 |
0.8291 |
| A0A1Q2TKJ3 | GH49 | 3 | 566 | 200 | 797 | 0.4843 |
0.5807 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5xs8-assembly1.cif.gz_A | 91 | 576 | 1 | 474 | 0.7094 |
0.7931 |
| 3vlw-assembly2.cif.gz_B | 85 | 576 | 3 | 488 | 0.7012 |
0.7789 |
| 6jhx-assembly2.cif.gz_B | 85 | 576 | 4 | 483 | 0.7008 |
0.783 |
| 5h6u-assembly1.cif.gz_A | 85 | 576 | 2 | 486 | 0.7 |
0.7774 |
| 6fth-assembly1.cif.gz_A | 88 | 576 | 1 | 495 | 0.6973 |
0.775 |
| 4tqu-assembly1.cif.gz_Q | 85 | 575 | 4 | 491 | 0.6928 |
0.7703 |
| 3omb-assembly1.cif.gz_A | 84 | 576 | 2 | 503 | 0.6909 |
0.7676 |
| 5g62-assembly2.cif.gz_B | 91 | 576 | 1 | 490 | 0.682 |
0.7591 |
| 5g5y-assembly1.cif.gz_A | 86 | 576 | 1 | 490 | 0.6683 |
0.7419 |
| 6wpn-assembly1.cif.gz_A | 93 | 565 | 1 | 395 | 0.6616 |
0.7976 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q795R2-F1-model_v4 | 80 | 575 | 32 | 498 | 0.6772 |
0.7858 |
| AF-D4GP35-F1-model_v4 | 24 | 564 | 19 | 459 | 0.59 |
0.6958 |
| AF-Q9Z3R5-F1-model_v4 | 85 | 565 | 50 | 458 | 0.587 |
0.7367 |