Cluster: BackhedF_2015_ERR525690_bin.1_CGC101
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_00021
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_3366 | BackhedF_2015_ERR525690_bin.1_k119_3366_12 | 21754 | 22638 | - | 3.A.1.1.29 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3366 | BackhedF_2015_ERR525690_bin.1_k119_3366_13 | 22654 | 23592 | - | 3.A.1.1.10 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_3366 | BackhedF_2015_ERR525690_bin.1_k119_3366_14 | 23920 | 25986 | - | URO-D | URO-D |
| NULL(UNKNOWN) | BackhedF_2015_ERR525690_bin.1_k119_3366 | BackhedF_2015_ERR525690_bin.1_k119_3366_15 | 26025 | 28247 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3366 | BackhedF_2015_ERR525690_bin.1_k119_3366_16 | 28300 | 30792 | - | GH38 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_3366 | BackhedF_2015_ERR525690_bin.1_k119_3366_17 | 31028 | 31708 | - | PDDEXK_2 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_3366 | BackhedF_2015_ERR525690_bin.1_k119_3366_18 | 32245 | 34845 | - | FtsX | FtsX |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3366 | BackhedF_2015_ERR525690_bin.1_k119_3366_19 | 34858 | 35526 | - | 3.A.1.122.14 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3366_12
Type: TC
Location: 21754 - 22638 (-)
Type: TC
Location: 21754 - 22638 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3366_13
Type: TC
Location: 22654 - 23592 (-)
Type: TC
Location: 22654 - 23592 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3366_14
Type: pfam
Location: 23920 - 25986 (-)
Type: pfam
Location: 23920 - 25986 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3366_15
Type:
Location: 26025 - 28247 (-)
Type:
Location: 26025 - 28247 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3366_16
Type: CAZyme
Location: 28300 - 30792 (-)
Type: CAZyme
Location: 28300 - 30792 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3366_17
Type: pfam
Location: 31028 - 31708 (-)
Type: pfam
Location: 31028 - 31708 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3366_18
Type: pfam
Location: 32245 - 34845 (-)
Type: pfam
Location: 32245 - 34845 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3366_19
Type: TC
Location: 34858 - 35526 (-)
Type: TC
Location: 34858 - 35526 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.