PROTEIN: BackhedF_2015_ERR525690_bin.1_k119_3366_15
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Protein File & Metadata
Source:
BackhedF_2015_ERR525690_bin.1_k119_3366_15.pdb
Genome ID:
Protein ID:
BackhedF_2015_ERR525690_bin.1_k119_3366_15
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Protein Sequence
MEYQIVFKQF HESTPVLEEQ WKPDRSIKEQ WKNMDQIPCR IQCIRSDEEN EQRFLLRTEM 60 IHASEKPISI SLEFINEEWT GREYVFMPAA VYDGNRMESK RISYPPFHAG RRSEGWDRVI 120 TDIPHLNKEG KKSGISMRSG DMSTPAMGYF MEDQREGVLI LANHIVHGRY TGFTVSEMEN 180 QAVFGVSCPA VREEMKYFFG ELPDGSGFYP TCEAPSDDVG MMLREGERVE MEIRYFRFPA 240 ENLNQYFTKF NELREEMEKG QEFCSIPFSK AYDAIKEKYI HMNFTDEGYY RVGTENDVPP 300 SYWQSGWVGG GMNSYAFLLE DNGLARSQSV SSLKFITEHL QMENGWFIPM YANGQRYGDD 360 FLNKDSPVLL VRKDADLLYF LIKQAFYLKS QGELPEQMES SITRQADAFV RFYQKNRQLG 420 QFINMQQETI LQGDTASAAI ASAALALVYE YFKRPEYLET AEALGVLYWE EYLKKGMLNG 480 GPGEICQAPD SESAFGFLES CVQLYETTGK EKWLQASREA FELAVTWVMS YDFHLPERST 540 AAKMKAHTRG TVFANAQNKH SAPGICTLSG NSMLKLYRFT GDQKYLNWMS RISHSLSQFV 600 SLQERPIDTL AGRALPAGYI NERVQTSDWE GKETIGEFLY GSNWPEVTML LTYVEIPGIY 660 LDLDRKVLQC SDHIIAEIVK DDEREMLIKI CNPTPYDAVV TLMTDHSLDP VSIGHPYFED 720 MQKIEISAGM VINAAISVGE 740
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-U7Q602-F1-model_v4 | 1 | 740 | 60 | 848 | 0.6289 |
0.7136 |
| AF-O53432-F1-model_v4 | 94 | 740 | 33 | 658 | 0.4726 |
0.5375 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJK45749.1 | GH0 | 1 | 740 | 41 | 771 | 0.9017 |
0.9403 |
| A0A268K8D9 | GH182 | 1 | 674 | 26 | 673 | 0.8199 |
0.8981 |
| WHP16390.1 | GH182 | 1 | 675 | 24 | 673 | 0.8166 |
0.8922 |
| AF-A0A4Y1VDV5-F1-model_v4 | GH182 | 1 | 719 | 14 | 665 | 0.8061 |
0.8743 |
| AF-A0A109W1T4-F1-model_v4 | GH182 | 1 | 720 | 18 | 657 | 0.8048 |
0.8824 |
| AF-A0A448L4J4-F1-model_v4 | GH182 | 1 | 717 | 23 | 664 | 0.8037 |
0.8831 |
| AF-F0SA38-F1-model_v4 | GH182 | 1 | 720 | 23 | 670 | 0.8029 |
0.879 |
| A0A9E8YN59 | GH182 | 1 | 718 | 19 | 666 | 0.8026 |
0.8768 |
| A0A255SPN4 | GH182 | 1 | 719 | 22 | 665 | 0.8025 |
0.8807 |
| AF-A0A7G1I4T0-F1-model_v4 | GH182 | 1 | 719 | 22 | 673 | 0.8024 |
0.8749 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A268K8D9 | GH182 | 1 | 674 | 26 | 673 | 0.8199 |
0.8981 |
| WHP16390.1 | GH182 | 1 | 675 | 24 | 673 | 0.8166 |
0.8922 |
| A0A9E8YN59 | GH182 | 1 | 718 | 19 | 666 | 0.8026 |
0.8768 |
| A0A255SPN4 | GH182 | 1 | 719 | 22 | 665 | 0.8025 |
0.8807 |
| UJH67547.1 | GH182 | 1 | 718 | 30 | 670 | 0.7886 |
0.8742 |
| A0A139L1L8 | GH182 | 1 | 720 | 49 | 703 | 0.7857 |
0.8712 |
| A0A6I6K1P7 | GH182 | 1 | 676 | 41 | 678 | 0.7686 |
0.8595 |
| A0A2S0VPZ6 | GH182 | 1 | 722 | 54 | 721 | 0.7617 |
0.8395 |
| A0A1U9NH28 | GH182 | 1 | 674 | 47 | 681 | 0.7616 |
0.8572 |
| WJH33832.1 | GH182 | 167 | 740 | 1 | 521 | 0.647 |
0.7825 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 1 | 716 | 3 | 669 | 0.5744 |
0.6173 |
| 5nok-assembly1.cif.gz_A | 1 | 716 | 6 | 668 | 0.569 |
0.6138 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.