Cluster: B65.bin_10_CGC53
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: B65.bin_10
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B65_contig_437 | B65_contig_437_1431 | 1590810 | 1592177 | - | GH5_4 |
| CAZyme | B65_contig_437 | B65_contig_437_1432 | 1592233 | 1593345 | - | GH130_2 |
| TF | B65_contig_437 | B65_contig_437_1433 | 1593456 | 1594472 | - | LacI |
| TC | B65_contig_437 | B65_contig_437_1434 | 1594494 | 1595138 | - | 9.B.28.1.8 |
| STP | B65_contig_437 | B65_contig_437_1435 | 1595302 | 1596789 | - | SBP_bac_1 |
| TC | B65_contig_437 | B65_contig_437_1436 | 1596842 | 1597810 | - | 3.A.1.1.11 |
Gene ID: B65_contig_437_1431
Type: CAZyme
Location: 1590810 - 1592177 (-)
Type: CAZyme
Location: 1590810 - 1592177 (-)
Gene ID: B65_contig_437_1432
Type: CAZyme
Location: 1592233 - 1593345 (-)
Type: CAZyme
Location: 1592233 - 1593345 (-)
Gene ID: B65_contig_437_1433
Type: TF
Location: 1593456 - 1594472 (-)
Type: TF
Location: 1593456 - 1594472 (-)
Gene ID: B65_contig_437_1434
Type: TC
Location: 1594494 - 1595138 (-)
Type: TC
Location: 1594494 - 1595138 (-)
Gene ID: B65_contig_437_1435
Type: STP
Location: 1595302 - 1596789 (-)
Type: STP
Location: 1595302 - 1596789 (-)
Gene ID: B65_contig_437_1436
Type: TC
Location: 1596842 - 1597810 (-)
Type: TC
Location: 1596842 - 1597810 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B65_contig_437_1432 | vegetarian > omnivore | 1.10109 | 0.00102 |
| B65_contig_437_1432 | vegetarian > vegan | 1.48314 | 0.00455 |